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WHRN whirlin [ Anser cygnoides (Swan goose) ]

Gene ID: 106037039, updated on 13-Mar-2024

Summary

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Gene symbol
WHRN
Gene description
whirlin
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927668.1 (2729503..2784164, complement)

NW_025927668.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125181405 Neighboring gene AT-hook transcription factor Neighboring gene ATPase H+ transporting V1 subunit G1 Neighboring gene transmembrane protein 268

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025927668 Unplaced Scaffold Reference GooseV1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in auditory receptor cell stereocilium organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sensory perception of sound IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in photoreceptor inner segment IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of stereocilia ankle link complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in stereocilium tip IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
whirlin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anser cygnoides Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GooseV1.0 Primary Assembly

Genomic

  1. NW_025927668.1 Reference GooseV1.0 Primary Assembly

    Range
    2729503..2784164 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048055991.1 → XP_047911948.1  whirlin isoform X3

  2. XM_048055983.1 → XP_047911940.1  whirlin isoform X2

    UniProtKB/TrEMBL
    A0A8B9EGX1

  3. XM_048055976.1 → XP_047911933.1  whirlin isoform X1

    UniProtKB/TrEMBL
    A0A8B9EK82
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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