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LAMA4 laminin subunit alpha 4 [ Anser cygnoides (Swan goose) ]

Gene ID: 106032574, updated on 3-Apr-2024

Summary

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Gene symbol
LAMA4
Gene description
laminin subunit alpha 4
See related
EnsemblRapid:ENSACDG00000010446
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
39
Annotation release Status Assembly Chr Location
100 current GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927799.1 (962351..1059694)

NW_025927799.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106032551 Neighboring gene uncharacterized LOC125185032 Neighboring gene uncharacterized LOC125185031 Neighboring gene tubulin epsilon 1 Neighboring gene cellular communication network factor 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025927799 Unplaced Scaffold Reference GooseV1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anser cygnoides Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GooseV1.0 Primary Assembly

Genomic

  1. NW_025927799.1 Reference GooseV1.0 Primary Assembly

    Range
    962351..1059694
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048081101.1 → XP_047937058.1  laminin subunit alpha-4 isoform X3

  2. XM_048081100.1 → XP_047937057.1  laminin subunit alpha-4 isoform X1

  3. XM_013175564.2 → XP_013031018.1  laminin subunit alpha-4 isoform X2

    UniProtKB/TrEMBL
    A0A8B9DGA0
    Related
    ENSACDP00000018168.1
    Conserved Domains (7) summary
    smart00282
    Location:881 → 1015
    LamG; Laminin G domain
    COG1340
    Location:416 → 747
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    cd00055
    Location:189 → 241
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:1473 → 1628
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam06008
    Location:300 → 556
    Laminin_I; Laminin Domain I
    pfam06009
    Location:736 → 864
    Laminin_II; Laminin Domain II
    cl02488
    Location:385 → 599
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
Nucleotide Protein
Heading Accession and Version

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