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HPCAL1 hippocalcin like 1 [ Anser cygnoides (Swan goose) ]

Gene ID: 106030720, updated on 13-Mar-2024

Summary

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Gene symbol
HPCAL1
Gene description
hippocalcin like 1
See related
EnsemblRapid:ENSACDG00000011911
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927717.1 (3224447..3267064, complement)

NW_025927717.1Genomic Context describing neighboring genes Neighboring gene nucleolar protein 10 Neighboring gene uncharacterized LOC125183644 Neighboring gene ornithine decarboxylase 1 Neighboring gene uncharacterized LOC106030718 Neighboring gene uncharacterized LOC106030831 Neighboring gene uncharacterized LOC106030716

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025927717 Unplaced Scaffold Reference GooseV1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hippocalcin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anser cygnoides Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GooseV1.0 Primary Assembly

Genomic

  1. NW_025927717.1 Reference GooseV1.0 Primary Assembly

    Range
    3224447..3267064 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013172617.2 → XP_013028071.1  hippocalcin-like protein 1

    See identical proteins and their annotated locations for XP_013028071.1

    UniProtKB/TrEMBL
    A0A8B9DLS8
    Conserved Domains (1) summary
    COG5126
    Location:13 → 179
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  2. XM_013172618.2 → XP_013028072.1  hippocalcin-like protein 1

    See identical proteins and their annotated locations for XP_013028072.1

    UniProtKB/TrEMBL
    A0A8B9DLS8
    Related
    ENSACDP00000020749.1
    Conserved Domains (1) summary
    COG5126
    Location:13 → 179
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  3. XM_048071326.1 → XP_047927283.1  hippocalcin-like protein 1

    UniProtKB/TrEMBL
    A0A8B9DLS8

  4. XM_013172619.2 → XP_013028073.1  hippocalcin-like protein 1

    See identical proteins and their annotated locations for XP_013028073.1

    UniProtKB/TrEMBL
    A0A8B9DLS8
    Conserved Domains (1) summary
    COG5126
    Location:13 → 179
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
Nucleotide Protein
Heading Accession and Version

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