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MUC5B mucin 5B, oligomeric mucus/gel-forming [ Mustela putorius furo (domestic ferret) ]

Gene ID: 106006548, updated on 13-Mar-2024

Summary

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Gene symbol
MUC5B
Gene description
mucin 5B, oligomeric mucus/gel-forming
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
49
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421288.1 (16217059..16245582, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569213.1 (9082263..9110696, complement)

NW_025421288.1Genomic Context describing neighboring genes Neighboring gene BR serine/threonine kinase 2 Neighboring gene toll interacting protein Neighboring gene mucin 5AC, oligomeric mucus/gel-forming Neighboring gene mucin 2, oligomeric mucus/gel-forming

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mucin-5B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421288.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    16217059..16245582 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045066780.1 → XP_044922715.1  mucin-5B

    UniProtKB/TrEMBL
    A0A8U0RDK9
    Conserved Domains (7) summary
    smart00041
    Location:4223 → 4307
    CT; C-terminal cystine knot-like domain (CTCK)
    smart00216
    Location:882 → 1040
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:613 → 683
    C8; This domain contains 8 conserved cysteine residues
    PHA03247
    Location:1772 → 2065
    PHA03247; large tegument protein UL36; Provisional
    PHA03307
    Location:3220 → 3497
    PHA03307; transcriptional regulator ICP4; Provisional
    pfam05109
    Location:2342 → 2806
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cl17735
    Location:4086 → 4148
    VWC; von Willebrand factor type C domain
Nucleotide Protein
Heading Accession and Version

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