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Rif1 replication timing regulatory factor 1 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105995269, updated on 13-Mar-2024

Summary

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Gene symbol
Rif1
Gene description
replication timing regulatory factor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
36
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267221.1 (4559482..4628933)

NW_012267221.1Genomic Context describing neighboring genes Neighboring gene cyclin-dependent kinase 1 Neighboring gene TNF alpha induced protein 6 Neighboring gene nebulin Neighboring gene ADP ribosylation factor like GTPase 5A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267221.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in telomere maintenance IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
telomere-associated protein RIF1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267221.1 Reference Dord_2.0

    Range
    4559482..4628933
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013028979.1 → XP_012884433.1  telomere-associated protein RIF1 isoform X1

    UniProtKB/TrEMBL
    A0A1S3G6I2
    Conserved Domains (2) summary
    pfam09528
    Location:1807 → 2130
    Ehrlichia_rpt; Ehrlichia tandem repeat (Ehrlichia_rpt)
    pfam12231
    Location:20 → 361
    Rif1_N; Rap1-interacting factor 1 N terminal

  2. XM_013028987.1 → XP_012884441.1  telomere-associated protein RIF1 isoform X2

    UniProtKB/TrEMBL
    A0A1S3G6J1
    Conserved Domains (2) summary
    pfam09528
    Location:1807 → 2130
    Ehrlichia_rpt; Ehrlichia tandem repeat (Ehrlichia_rpt)
    pfam12231
    Location:20 → 361
    Rif1_N; Rap1-interacting factor 1 N terminal
Nucleotide Protein
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