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Psip1 PC4 and SRSF1 interacting protein 1 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105989020, updated on 13-Mar-2024

Summary

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Gene symbol
Psip1
Gene description
PC4 and SRSF1 interacting protein 1
See related
Ensembl:ENSDORG00000004907
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267269.1 (1904747..1955406, complement)

NW_012267269.1Genomic Context describing neighboring genes Neighboring gene stathmin-like Neighboring gene small nuclear RNA activating complex polypeptide 3 Neighboring gene coiled-coil domain containing 171 Neighboring gene basonuclin zinc finger protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267269.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PC4 and SFRS1-interacting protein
Names
PC4 and SFRS1 interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267269.1 Reference Dord_2.0

    Range
    1904747..1955406 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013020815.1 → XP_012876269.1  PC4 and SFRS1-interacting protein isoform X1

    See identical proteins and their annotated locations for XP_012876269.1

    UniProtKB/TrEMBL
    A0A1S3FJR2
    Conserved Domains (2) summary
    cd05834
    Location:3 → 87
    HDGF_related; The PWWP domain is an essential part of the Hepatoma Derived Growth Factor (HDGF) family of proteins, and is necessary for DNA binding by HDGF. This family of endogenous nuclear-targeted mitogens includes HRP (HDGF-related proteins 1, 2, 3, 4, or HPR1, ...
    pfam11467
    Location:349 → 450
    LEDGF; Lens epithelium-derived growth factor (LEDGF)

  2. XM_013020814.1 → XP_012876268.1  PC4 and SFRS1-interacting protein isoform X1

    See identical proteins and their annotated locations for XP_012876268.1

    UniProtKB/TrEMBL
    A0A1S3FJR2
    Related
    ENSDORP00000004592.2, ENSDORT00000004907.2
    Conserved Domains (2) summary
    cd05834
    Location:3 → 87
    HDGF_related; The PWWP domain is an essential part of the Hepatoma Derived Growth Factor (HDGF) family of proteins, and is necessary for DNA binding by HDGF. This family of endogenous nuclear-targeted mitogens includes HRP (HDGF-related proteins 1, 2, 3, 4, or HPR1, ...
    pfam11467
    Location:349 → 450
    LEDGF; Lens epithelium-derived growth factor (LEDGF)

  3. XM_013020816.1 → XP_012876270.1  PC4 and SFRS1-interacting protein isoform X2

    UniProtKB/TrEMBL
    A0A1S3FIX6
    Conserved Domains (2) summary
    cd05834
    Location:3 → 87
    HDGF_related; The PWWP domain is an essential part of the Hepatoma Derived Growth Factor (HDGF) family of proteins, and is necessary for DNA binding by HDGF. This family of endogenous nuclear-targeted mitogens includes HRP (HDGF-related proteins 1, 2, 3, 4, or HPR1, ...
    pfam11467
    Location:349 → 403
    LEDGF; Lens epithelium-derived growth factor (LEDGF)

  4. XM_013020817.1 → XP_012876271.1  PC4 and SFRS1-interacting protein isoform X3

    UniProtKB/TrEMBL
    A0A1S3FID4
    Conserved Domains (1) summary
    cd05834
    Location:3 → 87
    HDGF_related; The PWWP domain is an essential part of the Hepatoma Derived Growth Factor (HDGF) family of proteins, and is necessary for DNA binding by HDGF. This family of endogenous nuclear-targeted mitogens includes HRP (HDGF-related proteins 1, 2, 3, 4, or HPR1, ...
Nucleotide Protein
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