U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Nrxn3 neurexin 3 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105984164, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Nrxn3
Gene description
neurexin 3
See related
Ensembl:ENSDORG00000002895
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
29
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267218.1 (18626638..20131687, complement)

NW_012267218.1Genomic Context describing neighboring genes Neighboring gene centrosomal protein 128 Neighboring gene iodothyronine deiodinase 2 Neighboring gene cyclin-dependent kinase 1-like Neighboring gene aarF domain containing kinase 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_012267218.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
neurexin 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267218.1 Reference Dord_2.0

    Range
    18626638..20131687 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013014269.1 → XP_012869723.1  neurexin 3 isoform X1

    UniProtKB/TrEMBL
    A0A1S3EZ76
    Conserved Domains (6) summary
    smart00282
    Location:276 → 415
    LamG; Laminin G domain
    cd00054
    Location:649 → 682
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00110
    Location:5 → 151
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00008
    Location:172 → 201
    EGF; EGF-like domain
    pfam01034
    Location:1604 → 1639
    Syndecan; Syndecan domain
    pfam02210
    Location:901 → 1029
    Laminin_G_2; Laminin G domain

  2. XM_013014299.1 → XP_012869753.1  neurexin 3 isoform X5

    UniProtKB/TrEMBL
    A0A1S3EZB2
    Conserved Domains (2) summary
    cd00110
    Location:95 → 244
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam01034
    Location:572 → 607
    Syndecan; Syndecan domain

  3. XM_013014277.1 → XP_012869731.1  neurexin 3 isoform X2

    UniProtKB/TrEMBL
    A0A1S3EZ84
    Related
    ENSDORP00000002718.2, ENSDORT00000002895.2
    Conserved Domains (6) summary
    smart00282
    Location:282 → 413
    LamG; Laminin G domain
    cd00054
    Location:647 → 680
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00110
    Location:35 → 181
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00008
    Location:202 → 231
    EGF; EGF-like domain
    pfam01034
    Location:1497 → 1532
    Syndecan; Syndecan domain
    pfam02210
    Location:899 → 1027
    Laminin_G_2; Laminin G domain

  4. XM_013014291.1 → XP_012869745.1  neurexin 3 isoform X4

    UniProtKB/TrEMBL
    A0A1S3F0M3
    Conserved Domains (5) summary
    smart00282
    Location:97 → 246
    LamG; Laminin G domain
    cd00054
    Location:274 → 307
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00110
    Location:718 → 867
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam01034
    Location:993 → 1028
    Syndecan; Syndecan domain
    pfam02210
    Location:526 → 654
    Laminin_G_2; Laminin G domain

  5. XM_013014284.1 → XP_012869738.1  neurexin 3 isoform X3

    UniProtKB/TrEMBL
    A0A1S3EZA1
    Related
    ENSDORP00000022706.1, ENSDORT00000029735.1
    Conserved Domains (5) summary
    smart00282
    Location:97 → 246
    LamG; Laminin G domain
    cd00054
    Location:274 → 307
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00110
    Location:718 → 897
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam01034
    Location:1023 → 1058
    Syndecan; Syndecan domain
    pfam02210
    Location:526 → 654
    Laminin_G_2; Laminin G domain

  6. XM_013014321.1 → XP_012869775.1  neurexin 3 isoform X8

    UniProtKB/TrEMBL
    A0A1S3F0Q3
    Related
    ENSDORP00000020313.1, ENSDORT00000030375.1
    Conserved Domains (2) summary
    cd00110
    Location:95 → 244
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam01034
    Location:367 → 402
    Syndecan; Syndecan domain

  7. XM_013014314.1 → XP_012869768.1  neurexin 3 isoform X7

    UniProtKB/TrEMBL
    A0A1S3EZC8
    Conserved Domains (2) summary
    cd00110
    Location:95 → 274
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam01034
    Location:394 → 429
    Syndecan; Syndecan domain

  8. XM_013014306.1 → XP_012869760.1  neurexin 3 isoform X6

    UniProtKB/TrEMBL
    A0A1S3F0N8
    Related
    ENSDORP00000024373.1, ENSDORT00000029092.1
    Conserved Domains (2) summary
    cd00110
    Location:95 → 274
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam01034
    Location:504 → 539
    Syndecan; Syndecan domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.