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Arid4a AT-rich interaction domain 4A [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105983926, updated on 13-Mar-2024

Summary

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Gene symbol
Arid4a
Gene description
AT-rich interaction domain 4A
See related
Ensembl:ENSDORG00000002170
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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See Arid4a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267218.1 (36099759..36171635, complement)

NW_012267218.1Genomic Context describing neighboring genes Neighboring gene KIAA0586 ortholog Neighboring gene 60S ribosomal protein L17 pseudogene Neighboring gene translocase of inner mitochondrial membrane 9 Neighboring gene translocase of outer mitochondrial membrane 20 like Neighboring gene proteasome 20S subunit alpha 3 Neighboring gene actin related protein 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267218.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AT-rich interactive domain-containing protein 4A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267218.1 Reference Dord_2.0

    Range
    36099759..36171635 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013013959.1 → XP_012869413.1  AT-rich interactive domain-containing protein 4A

    UniProtKB/TrEMBL
    A0A1S3EYC2
    Related
    ENSDORP00000002037.2, ENSDORT00000002172.2
    Conserved Domains (4) summary
    smart00501
    Location:320 → 406
    BRIGHT; BRIGHT, ARID (A/T-rich interaction domain) domain
    smart00333
    Location:58 → 113
    TUDOR; Tudor domain
    pfam08169
    Location:171 → 261
    RBB1NT; RBB1NT (NUC162) domain
    pfam11717
    Location:579 → 633
    Tudor-knot; RNA binding activity-knot of a chromodomain
Nucleotide Protein
Heading Accession and Version

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