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Sptlc3 serine palmitoyltransferase long chain base subunit 3 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105981440, updated on 13-Mar-2024

Summary

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Gene symbol
Sptlc3
Gene description
serine palmitoyltransferase long chain base subunit 3
See related
Ensembl:ENSDORG00000010161
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267229.1 (3333252..3441397, complement)

NW_012267229.1Genomic Context describing neighboring genes Neighboring gene taspase 1 Neighboring gene isthmin 1 Neighboring gene 40S ribosomal protein S25 pseudogene Neighboring gene BTB domain containing 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267229.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine C-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of serine C-palmitoyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine palmitoyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267229.1 Reference Dord_2.0

    Range
    3333252..3441397 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013010632.1 → XP_012866086.1  serine palmitoyltransferase 3

    UniProtKB/TrEMBL
    A0A1S3ENY6
    Related
    ENSDORP00000009552.2, ENSDORT00000010161.2
    Conserved Domains (2) summary
    PLN02483
    Location:56 → 545
    PLN02483; serine palmitoyltransferase
    COG0156
    Location:108 → 520
    BioF; 7-keto-8-aminopelargonate synthetase or related enzyme [Coenzyme transport and metabolism]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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