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gas6 growth arrest-specific 6 [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105933803, updated on 13-Mar-2024

Summary

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Gene symbol
gas6
Gene description
growth arrest-specific 6
See related
Ensembl:ENSFHEG00000010074
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Orthologs
human zebrafish all
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Genomic context

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See gas6 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
15
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 4 NC_046364.1 (40652799..40666334, complement)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012234386.1 (81404..93952)

Chromosome 4 - NC_046364.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 255B Neighboring gene G protein-coupled receptor kinase 1 a Neighboring gene protein S Neighboring gene ras GTPase-activating protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
growth arrest-specific protein 6
Names
Contactin-associated 2-like protein
Growth arrest-specific protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046364.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    40652799..40666334 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012873502.3 → XP_012728956.2  growth arrest-specific protein 6

    UniProtKB/TrEMBL
    A0A3Q2P8N8
    Conserved Domains (6) summary
    smart00069
    Location:25 → 87
    GLA; Domain containing Gla (gamma-carboxyglutamate) residues
    smart00179
    Location:191 → 221
    EGF_CA; Calcium-binding EGF-like domain
    cd00054
    Location:113 → 149
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00110
    Location:292 → 444
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam12662
    Location:213 → 235
    cEGF; Complement Clr-like EGF-like
    pfam14670
    Location:155 → 189
    FXa_inhibition; Coagulation Factor Xa inhibitory site
Nucleotide Protein
Heading Accession and Version

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