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ppcs phosphopantothenoylcysteine synthetase [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105933684, updated on 13-Mar-2024

Summary

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Gene symbol
ppcs
Gene description
phosphopantothenoylcysteine synthetase
See related
Ensembl:ENSFHEG00000018575
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 20
Exon count:
4
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 20 NC_046380.1 (17805601..17812663, complement)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012234382.1 (1505407..1510108)

Chromosome 20 - NC_046380.1Genomic Context describing neighboring genes Neighboring gene epithelial membrane protein 3a (MAM blood group) Neighboring gene family with sequence similarity 83 member E Neighboring gene UTP3 small subunit processome component Neighboring gene forkhead box J3 Neighboring gene PR domain containing 2, with ZNF domain b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphopantothenate--cysteine ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in coenzyme A biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphopantothenate--cysteine ligase
Names
Phosphopantothenate--cysteine ligase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046380.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    17805601..17812663 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036151922.1 → XP_036007815.1  phosphopantothenate--cysteine ligase

    UniProtKB/TrEMBL
    A0A146ZX99
    Conserved Domains (1) summary
    PRK05579
    Location:10 → 270
    PRK05579; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

  2. XM_036151923.1 → XP_036007816.1  phosphopantothenate--cysteine ligase

    UniProtKB/TrEMBL
    A0A146ZX99
    Conserved Domains (1) summary
    PRK05579
    Location:10 → 270
    PRK05579; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

  3. XM_036151924.1 → XP_036007817.1  phosphopantothenate--cysteine ligase

    UniProtKB/TrEMBL
    A0A146ZX99
    Conserved Domains (1) summary
    PRK05579
    Location:10 → 270
    PRK05579; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Nucleotide Protein
Heading Accession and Version

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