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rims2a regulating synaptic membrane exocytosis 2a [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105933415, updated on 13-Mar-2024

Summary

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Gene symbol
rims2a
Gene description
regulating synaptic membrane exocytosis 2a
See related
Ensembl:ENSFHEG00000010025
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Also known as
rims2
Annotation information
Annotation category: partial on reference assembly
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 3
Exon count:
33
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 3 NC_046363.1 (7702119..7867971, complement)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012234377.1 (654118..850657, complement)

Chromosome 3 - NC_046363.1Genomic Context describing neighboring genes Neighboring gene dihydropyrimidinase Neighboring gene dendritic cell-specific transmembrane protein Neighboring gene uncharacterized protein K02A2.6-like Neighboring gene ddb1 and cul4 associated factor 13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane transporter binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion-regulated exocytosis of neurotransmitter IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of synaptic plasticity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoskeleton of presynaptic active zone IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in presynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
regulating synaptic membrane exocytosis protein 2
Names
Regulating synaptic membrane exocytosis protein 2
regulating synaptic membrane exocytosis 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046363.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    7702119..7867971 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036129426.1 → XP_035985319.1  regulating synaptic membrane exocytosis protein 2

    Conserved Domains (5) summary
    cd04028
    Location:1543 → 1688
    C2B_RIM1alpha; C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins
    cd04031
    Location:846 → 969
    C2A_RIM1alpha; C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins
    cd00992
    Location:693 → 774
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cl28890
    Location:153 → 209
    FYVE_like_SF; FYVE domain like superfamily
    cl22851
    Location:34 → 204
    PHD_SF; PHD finger superfamily
Nucleotide Protein
Heading Accession and Version

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