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pdf peptide deformylase, mitochondrial [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105931666, updated on 13-Mar-2024

Summary

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Gene symbol
pdf
Gene description
peptide deformylase, mitochondrial
See related
Ensembl:ENSFHEG00000009052
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 2 NC_046362.1 (39748936..39754007)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012224468.1 (564096..569962)

Chromosome 2 - NC_046362.1Genomic Context describing neighboring genes Neighboring gene tyrosine aminotransferase Neighboring gene uncharacterized LOC105931427 Neighboring gene spermatogenesis associated 2-like Neighboring gene SDR family oxidoreductase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide deformylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-terminal protein amino acid modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in co-translational protein modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-methionine modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peptide deformylase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046362.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    39748936..39754007
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021320522.2 → XP_021176197.2  peptide deformylase, mitochondrial

    UniProtKB/TrEMBL
    A0A3Q2P6S0
    Conserved Domains (1) summary
    pfam01327
    Location:73 → 239
    Pep_deformylase; Polypeptide deformylase
Nucleotide Protein
Heading Accession and Version

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