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trap1 TNF receptor-associated protein 1 [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105924961, updated on 13-Mar-2024

Summary

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Gene symbol
trap1
Gene description
TNF receptor-associated protein 1
See related
Ensembl:ENSFHEG00000010933
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 16
Exon count:
18
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 16 NC_046376.1 (20344672..20359062)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012224433.1 (704820..719455)

Chromosome 16 - NC_046376.1Genomic Context describing neighboring genes Neighboring gene adenylate cyclase type 9 Neighboring gene CREB binding protein b Neighboring gene MAPK regulated corepressor interacting protein 2 Neighboring gene dynein assembly factor 5, axonemal Neighboring gene protein kinase, cAMP-dependent, regulatory, type I, beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heat shock protein 75 kDa, mitochondrial
Names
Heat shock protein 75 kDa, mitochondrial
Heat shock protein 94c

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046376.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    20344672..20359062
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012860731.3 → XP_012716185.2  heat shock protein 75 kDa, mitochondrial

    UniProtKB/TrEMBL
    A0A3Q2PB48
    Conserved Domains (1) summary
    PRK05218
    Location:98 → 713
    PRK05218; heat shock protein 90; Provisional
Nucleotide Protein
Heading Accession and Version

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