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nrp2a neuropilin 2a [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105921503, updated on 13-Mar-2024

Summary

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Gene symbol
nrp2a
Gene description
neuropilin 2a
See related
Ensembl:ENSFHEG00000020462
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Also known as
nrp2
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 24
Exon count:
19
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 24 NC_046384.1 (13747724..13829835, complement)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012225189.1 (1490735..1571413, complement)

Chromosome 24 - NC_046384.1Genomic Context describing neighboring genes Neighboring gene cyclin Pas1/PHO80 domain containing 1 Neighboring gene ATP binding cassette subfamily B member 6 (LAN blood group) a Neighboring gene par-3 family cell polarity regulator beta a Neighboring gene zona pellucida sperm-binding protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables semaphorin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables vascular endothelial growth factor receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vascular endothelial growth factor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neuropilin-2a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046384.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    13747724..13829835 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021313389.2 → XP_021169064.2  neuropilin-2a isoform X2

    UniProtKB/TrEMBL
    A0A147AMC7
    Conserved Domains (4) summary
    cd06263
    Location:634 → 770
    MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
    cd00041
    Location:150 → 267
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00057
    Location:282 → 427
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
    pfam11980
    Location:821 → 899
    DUF3481; C-terminal domain of neuropilin glycoprotein

  2. XM_012857264.3 → XP_012712718.2  neuropilin-2a isoform X1

    UniProtKB/TrEMBL
    A0A147AMC7
    Conserved Domains (4) summary
    cd06263
    Location:634 → 770
    MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
    cd00041
    Location:150 → 267
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00057
    Location:282 → 427
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
    pfam11980
    Location:832 → 910
    DUF3481; C-terminal domain of neuropilin glycoprotein

  3. XM_012857265.3 → XP_012712719.2  neuropilin-2a isoform X3

    UniProtKB/TrEMBL
    A0A3Q2UNI9
    Conserved Domains (3) summary
    cd06263
    Location:634 → 770
    MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
    cd00041
    Location:150 → 267
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00057
    Location:282 → 427
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
Nucleotide Protein
Heading Accession and Version

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