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lactb2 lactamase, beta 2 [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105917885, updated on 13-Mar-2024

Summary

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Gene symbol
lactb2
Gene description
lactamase, beta 2
See related
Ensembl:ENSFHEG00000004336
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) Unplaced Scaffold NW_023397307.1 (105916..114929, complement)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012224679.1 (114194..122975, complement)

NW_023397307.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent 6-phosphofructokinase, platelet type-like Neighboring gene nuclear receptor coactivator 2 Neighboring gene transfer RNA arginine (anticodon UCU) Neighboring gene transfer RNA arginine (anticodon UCU) Neighboring gene transfer RNA arginine (anticodon UCU) Neighboring gene receptor-type tyrosine-protein phosphatase N2 Neighboring gene uncharacterized LOC118562283

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endoribonuclease LACTB2
Names
Beta-lactamase 2-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NW_023397307.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    105916..114929 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036134548.1 → XP_035990441.1  endoribonuclease LACTB2

    UniProtKB/TrEMBL
    A0A3Q2NVR6
    Conserved Domains (2) summary
    cd07722
    Location:14 → 200
    LACTB2-like_MBL-fold; uncharacterized subgroup which includes human lactamase beta 2 and related proteins; MBL-fold metallo hydrolase domain
    pfam17778
    Location:234 → 282
    BLACT_WH; Beta-lactamase associated winged helix domain
Nucleotide Protein
Heading Accession and Version

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