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spata18 spermatogenesis associated 18 [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105916851, updated on 13-Mar-2024

Summary

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Gene symbol
spata18
Gene description
spermatogenesis associated 18
See related
Ensembl:ENSFHEG00000019042
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 9
Exon count:
12
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 9 NC_046369.1 (31654850..31665392, complement)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012224606.1 (417983..428129, complement)

Chromosome 9 - NC_046369.1Genomic Context describing neighboring genes Neighboring gene RAS-like, family 11, member B Neighboring gene ubiquitin specific peptidase 46 Neighboring gene uncharacterized LOC105916844 Neighboring gene sarcoglycan, beta (dystrophin-associated glycoprotein)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mitochondrial protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitophagy by internal vacuole formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondria-eating protein
Names
Mitochondria-eating protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046369.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    31654850..31665392 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012851483.3 → XP_012706937.3  mitochondria-eating protein

    UniProtKB/TrEMBL
    A0A146SM04
    Conserved Domains (2) summary
    pfam15921
    Location:101 → 214
    CCDC158; Coiled-coil domain-containing protein 158
    pfam16026
    Location:255 → 442
    MIEAP; Mitochondria-eating protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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