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kpnb1 karyopherin (importin) beta 1 [ Clupea harengus (Atlantic herring) ]

Gene ID: 105913043, updated on 13-Mar-2024

Summary

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Gene symbol
kpnb1
Gene description
karyopherin (importin) beta 1
See related
EnsemblRapid:ENSCHAG00020019376
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 1
Exon count:
22
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 1 NC_045152.1 (2722039..2745053, complement)

Chromosome 1 - NC_045152.1Genomic Context describing neighboring genes Neighboring gene suppressor of cytokine signaling 7-like Neighboring gene cell division cycle associated 9 Neighboring gene small nucleolar RNA SNORA79 Neighboring gene small nucleolar RNA SNORA79 Neighboring gene small nucleolar RNA SNORA79 Neighboring gene small nucleolar RNA SNORA79 Neighboring gene ubiquitin conjugating enzyme E2 M Neighboring gene zf-CXXC and PHD_FXL19 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045152.1 Chromosome 1 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear import signal receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear localization sequence binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
importin subunit beta-1
Names
karyopherin subunit beta 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045152.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    2722039..2745053 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031564335.2 → XP_031420195.1  importin subunit beta-1 isoform X1

    UniProtKB/TrEMBL
    A0A6P8F8T5
    Related
    ENSCHAP00020043910.1, ENSCHAT00020047128.1
    Conserved Domains (2) summary
    COG5215
    Location:2 → 871
    KAP95; Karyopherin (importin) beta [Intracellular trafficking and secretion]
    sd00044
    Location:323 → 354
    HEAT; HEAT repeat [structural motif]

  2. XM_031564343.2 → XP_031420203.1  importin subunit beta-1 isoform X2

    UniProtKB/TrEMBL
    A0A6P8EVB7
    Related
    ENSCHAP00020043904.1, ENSCHAT00020047122.1
    Conserved Domains (2) summary
    COG5215
    Location:2 → 871
    KAP95; Karyopherin (importin) beta [Intracellular trafficking and secretion]
    sd00044
    Location:323 → 354
    HEAT; HEAT repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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