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capslb calcyphosine-like b [ Clupea harengus (Atlantic herring) ]

Gene ID: 105909143, updated on 13-Mar-2024

Summary

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Gene symbol
capslb
Gene description
calcyphosine-like b
See related
EnsemblRapid:ENSCHAG00020021765
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Also known as
capsl
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 12
Exon count:
6
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 12 NC_045163.1 (24684714..24687836)

Chromosome 12 - NC_045163.1Genomic Context describing neighboring genes Neighboring gene ral guanine nucleotide dissociation stimulator-like Neighboring gene uncharacterized LOC116222717 Neighboring gene LMBR1 domain containing 2b Neighboring gene interleukin 7 receptor Neighboring gene myosin VB

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045163.1 Chromosome 12 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcyphosine-like b
Names
calcyphosine like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045163.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    24684714..24687836
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031577549.2 → XP_031433409.1  calcyphosine-like b isoform X3

    UniProtKB/TrEMBL
    A0A6P8G2P1
    Related
    ENSCHAP00020049918.1, ENSCHAT00020053404.1
    Conserved Domains (1) summary
    PTZ00183
    Location:62 → 202
    PTZ00183; centrin; Provisional

  2. XM_012837753.3 → XP_012693207.2  calcyphosine-like b isoform X2

    UniProtKB/TrEMBL
    A0A6P3W9T5
    Related
    ENSCHAP00020049910.1, ENSCHAT00020053396.1
    Conserved Domains (1) summary
    PTZ00183
    Location:62 → 204
    PTZ00183; centrin; Provisional

  3. XM_012837746.3 → XP_012693200.2  calcyphosine-like b isoform X1

    UniProtKB/TrEMBL
    A0A6P3WAQ2
    Conserved Domains (1) summary
    cd15898
    Location:65 → 205
    EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
Nucleotide Protein
Heading Accession and Version

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