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cep57l1 centrosomal protein 57, like 1 [ Clupea harengus (Atlantic herring) ]

Gene ID: 105907272, updated on 13-Mar-2024

Summary

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Gene symbol
cep57l1
Gene description
centrosomal protein 57, like 1
See related
EnsemblRapid:ENSCHAG00020020569
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 15
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 15 NC_045166.1 (16326817..16339576)

Chromosome 15 - NC_045166.1Genomic Context describing neighboring genes Neighboring gene 5-hydroxytryptamine (serotonin) receptor 3A Neighboring gene macrophage-expressed gene 1 protein-like Neighboring gene CD164 molecule, sialomucin Neighboring gene peptidylprolyl isomerase (cyclophilin)-like 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045166.1 Chromosome 15 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables gamma-tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal protein CEP57L1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045166.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    16326817..16339576
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031581914.2 → XP_031437774.1  centrosomal protein CEP57L1 isoform X2

    UniProtKB/TrEMBL
    A0A6P8GF40
    Conserved Domains (2) summary
    pfam06657
    Location:385 → 457
    Cep57_MT_bd; Centrosome microtubule-binding domain of Cep57
    pfam14073
    Location:67 → 265
    Cep57_CLD; Centrosome localization domain of Cep57

  2. XM_012835562.3 → XP_012691016.2  centrosomal protein CEP57L1 isoform X1

    UniProtKB/TrEMBL
    A0A6P3W710
    Related
    ENSCHAP00020046620.1, ENSCHAT00020050047.1
    Conserved Domains (2) summary
    pfam06657
    Location:386 → 458
    Cep57_MT_bd; Centrosome microtubule-binding domain of Cep57
    pfam14073
    Location:67 → 266
    Cep57_CLD; Centrosome localization domain of Cep57
Nucleotide Protein
Heading Accession and Version

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