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cdk4 cyclin-dependent kinase 4 [ Clupea harengus (Atlantic herring) ]

Gene ID: 105907246, updated on 13-Mar-2024

Summary

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Gene symbol
cdk4
Gene description
cyclin-dependent kinase 4
See related
EnsemblRapid:ENSCHAG00020011096
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 5
Exon count:
10
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 5 NC_045156.1 (12277914..12287955, complement)

Chromosome 5 - NC_045156.1Genomic Context describing neighboring genes Neighboring gene arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 Neighboring gene tetraspanin-31 Neighboring gene E3 ubiquitin-protein ligase MARCHF9 Neighboring gene methyltransferase 1, tRNA methylguanosine

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045156.1 Chromosome 5 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cyclin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G1/S transition of mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of G2/M transition of mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cyclin-dependent protein kinase holoenzyme complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-dependent kinase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045156.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    12277914..12287955 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031567750.2 → XP_031423610.1  cyclin-dependent kinase 4 isoform X2

    UniProtKB/TrEMBL
    A0A6P8FJ68
    Conserved Domains (1) summary
    cl21453
    Location:6 → 293
    PKc_like; Protein Kinases, catalytic domain

  2. XM_031567749.2 → XP_031423609.1  cyclin-dependent kinase 4 isoform X1

    UniProtKB/TrEMBL
    A0A6P8FDL9
    Related
    ENSCHAP00020024427.1, ENSCHAT00020025975.1
    Conserved Domains (1) summary
    cl21453
    Location:17 → 304
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

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