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tcf25 transcription factor 25 (basic helix-loop-helix) [ Clupea harengus (Atlantic herring) ]

Gene ID: 105906516, updated on 13-Mar-2024

Summary

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Gene symbol
tcf25
Gene description
transcription factor 25 (basic helix-loop-helix)
See related
EnsemblRapid:ENSCHAG00020014864
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 6
Exon count:
18
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 6 NC_045157.1 (20107676..20124499)

Chromosome 6 - NC_045157.1Genomic Context describing neighboring genes Neighboring gene cytochrome b-245 light chain Neighboring gene mevalonate (diphospho) decarboxylase a Neighboring gene melanocortin 1 receptor Neighboring gene tubulin beta-3 chain

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045157.1 Chromosome 6 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RQC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor 25

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045157.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    20107676..20124499
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012834673.3 → XP_012690127.2  transcription factor 25

    UniProtKB/TrEMBL
    A0A6P3W5F8
    Related
    ENSCHAP00020033435.1, ENSCHAT00020035799.1
    Conserved Domains (1) summary
    pfam04910
    Location:245 → 585
    Tcf25; Transcriptional repressor TCF25
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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