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scn4ba sodium channel, voltage-gated, type IV, beta a [ Clupea harengus (Atlantic herring) ]

Gene ID: 105902157, updated on 13-Mar-2024

Summary

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Gene symbol
scn4ba
Gene description
sodium channel, voltage-gated, type IV, beta a
See related
EnsemblRapid:ENSCHAG00020002910
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Also known as
scn4b
Orthologs
human zebrafish all
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Genomic context

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See scn4ba in Genome Data Viewer
Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 9 NC_045160.1 (25419026..25446030)

Chromosome 9 - NC_045160.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein Neighboring gene sodium channel, voltage-gated, type II, beta Neighboring gene transmembrane serine protease 4a Neighboring gene uncharacterized protein DDB_G0284459-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045160.1 Chromosome 9 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sodium channel regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane transporter binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiac muscle cell action potential involved in contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of sodium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of ventricular cardiac muscle cell membrane repolarization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of voltage-gated sodium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium channel, voltage-gated, type IV, beta a
Names
sodium voltage-gated channel beta subunit 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045160.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    25419026..25446030
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012829697.3 → XP_012685151.1  sodium channel, voltage-gated, type IV, beta a

    See identical proteins and their annotated locations for XP_012685151.1

    UniProtKB/TrEMBL
    A0A6P3VZ12
    Related
    ENSCHAP00020005732.1, ENSCHAT00020006213.1
    Conserved Domains (1) summary
    cl11960
    Location:47 → 147
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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