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evi5l ecotropic viral integration site 5 like [ Clupea harengus (Atlantic herring) ]

Gene ID: 105901542, updated on 13-Mar-2024

Summary

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Gene symbol
evi5l
Gene description
ecotropic viral integration site 5 like
See related
EnsemblRapid:ENSCHAG00020012600
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Also known as
si:ch211-239f4.1
Orthologs
zebrafish all
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Genomic context

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See evi5l in Genome Data Viewer
Location:
chromosome: 24
Exon count:
19
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 24 NC_045175.1 (8960779..8998427, complement)

Chromosome 24 - NC_045175.1Genomic Context describing neighboring genes Neighboring gene extensin-like Neighboring gene zinc finger protein Gfi-1b-like Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa Neighboring gene CCN family member 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045175.1 Chromosome 24 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
EVI5-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045175.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    8960779..8998427 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031562121.1 → XP_031417981.1  EVI5-like protein isoform X4

    UniProtKB/TrEMBL
    A0A6P8F165
    Conserved Domains (2) summary
    smart00164
    Location:149 → 357
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    TIGR02168
    Location:395 → 741
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  2. XM_031562120.1 → XP_031417980.1  EVI5-like protein isoform X3

    UniProtKB/TrEMBL
    A0A6P8F1R7
    Related
    ENSCHAP00020027773.1, ENSCHAT00020029906.1
    Conserved Domains (2) summary
    smart00164
    Location:149 → 357
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    TIGR02168
    Location:395 → 742
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  3. XM_031562118.1 → XP_031417978.1  EVI5-like protein isoform X2

    UniProtKB/TrEMBL
    A0A6P8EP64
    Conserved Domains (2) summary
    smart00164
    Location:149 → 357
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    TIGR02168
    Location:395 → 752
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  4. XM_031562117.1 → XP_031417977.1  EVI5-like protein isoform X1

    UniProtKB/TrEMBL
    A0A6P8F492
    Related
    ENSCHAP00020027764.1, ENSCHAT00020029899.1
    Conserved Domains (2) summary
    smart00164
    Location:149 → 357
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    TIGR02168
    Location:395 → 753
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
Nucleotide Protein
Heading Accession and Version

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