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LOC105901415 NOP53 ribosome biogenesis factor [ Clupea harengus (Atlantic herring) ]

Gene ID: 105901415, updated on 7-Dec-2023

Summary

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Gene symbol
LOC105901415
Gene description
NOP53 ribosome biogenesis factor
See related
EnsemblRapid:ENSCHAG00020011445
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Also known as
nop53; gltscr2
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Genomic context

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See LOC105901415 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
13
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 9 NC_045160.1 (9977336..9983592)

Chromosome 9 - NC_045160.1Genomic Context describing neighboring genes Neighboring gene macrophage metalloelastase-like Neighboring gene protein NPAT-like Neighboring gene gap junction delta-2 protein-like Neighboring gene uncharacterized LOC122133150

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045160.1 Chromosome 9 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5S rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribosome biogenesis protein NOP53
Names
glioma tumor suppressor candidate region gene 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045160.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    9977336..9983592
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042708688.1 → XP_042564622.1  ribosome biogenesis protein NOP53

    UniProtKB/TrEMBL
    A0A8M1KC06
    Related
    ENSCHAP00020024905.1, ENSCHAT00020026664.1
    Conserved Domains (1) summary
    pfam07767
    Location:48 → 435
    Nop53; Nop53 (60S ribosomal biogenesis)
Nucleotide Protein
Heading Accession and Version

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