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spata7 spermatogenesis associated 7 [ Clupea harengus (Atlantic herring) ]

Gene ID: 105895764, updated on 13-Mar-2024

Summary

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Gene symbol
spata7
Gene description
spermatogenesis associated 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 14
Exon count:
10
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 14 NC_045165.1 (23182562..23187273, complement)

Chromosome 14 - NC_045165.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 98 member B Neighboring gene protein tyrosine phosphatase non-receptor type 21 Neighboring gene potassium channel, subfamily K, member 10b Neighboring gene ovarian cancer G-protein coupled receptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045165.1 Chromosome 14 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in photoreceptor cell maintenance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to photoreceptor connecting cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to photoreceptor outer segment IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in photoreceptor distal connecting cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rod photoreceptor outer segment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spermatogenesis-associated protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045165.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    23182562..23187273 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031580935.2 → XP_031436795.1  spermatogenesis-associated protein 7

    UniProtKB/TrEMBL
    A0A6P8GPQ6
    Conserved Domains (1) summary
    pfam15244
    Location:14 → 366
    HSD3; Spermatogenesis-associated protein 7, or HSD3
Nucleotide Protein
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Gene LinkOut

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