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herpud1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 [ Clupea harengus (Atlantic herring) ]

Gene ID: 105892557, updated on 13-Mar-2024

Summary

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Gene symbol
herpud1
Gene description
homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
See related
EnsemblRapid:ENSCHAG00020022616
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Orthologs
human zebrafish all
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Genomic context

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See herpud1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 3 NC_045154.1 (19636205..19645877, complement)

Chromosome 3 - NC_045154.1Genomic Context describing neighboring genes Neighboring gene NLR family, CARD domain containing 5 Neighboring gene cholesteryl ester transfer protein, plasma Neighboring gene solute carrier family 12 member 3 Neighboring gene nucleoporin 93

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045154.1 Chromosome 3 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum unfolded protein response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein
Names
homocysteine inducible ER protein with ubiquitin like domain 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045154.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    19636205..19645877 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012818843.3 → XP_012674297.1  homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein

    UniProtKB/TrEMBL
    A0A6P3VKL2
    Related
    ENSCHAP00020051811.1, ENSCHAT00020055546.1
    Conserved Domains (1) summary
    cd01790
    Location:14 → 89
    Ubl_HERP; ubiquitin-like (Ubl) domain found in homocysteine-inducible endoplasmic reticulum stress protein HERP
Nucleotide Protein
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Gene LinkOut

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