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LOC105890894 EMAP like 6 [ Clupea harengus (Atlantic herring) ]

Gene ID: 105890894, updated on 7-Dec-2023

Summary

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Gene symbol
LOC105890894
Gene description
EMAP like 6
See related
EnsemblRapid:ENSCHAG00020013522
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Also known as
eml6
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Genomic context

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Location:
chromosome: 13
Exon count:
46
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 13 NC_045164.1 (3331163..3392960)

Chromosome 13 - NC_045164.1Genomic Context describing neighboring genes Neighboring gene acylphosphatase-2-like Neighboring gene spectrin beta chain, non-erythrocytic 1 Neighboring gene reticulon-4-like Neighboring gene clathrin heavy chain linker domain-containing protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045164.1 Chromosome 13 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
echinoderm microtubule-associated protein-like 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045164.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    3331163..3392960
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031578974.1 → XP_031434834.1  echinoderm microtubule-associated protein-like 6 isoform X3

    UniProtKB/TrEMBL
    A0A6P8G672
    Conserved Domains (4) summary
    COG2319
    Location:1403 → 1843
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:64 → 103
    7WD40; WD40 repeat [structural motif]
    pfam03451
    Location:2 → 48
    HELP; HELP motif
    cl29593
    Location:725 → 1026
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_031578971.1 → XP_031434831.1  echinoderm microtubule-associated protein-like 6 isoform X1

    UniProtKB/TrEMBL
    A0A6P8GD35
    Conserved Domains (4) summary
    COG2319
    Location:1407 → 1847
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:64 → 103
    7WD40; WD40 repeat [structural motif]
    pfam03451
    Location:2 → 48
    HELP; HELP motif
    cl29593
    Location:725 → 1026
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_042709480.1 → XP_042565414.1  echinoderm microtubule-associated protein-like 6 isoform X5

    UniProtKB/TrEMBL
    A0A8M1KUY7
    Related
    ENSCHAP00020029645.1, ENSCHAT00020031901.1
    Conserved Domains (3) summary
    COG2319
    Location:1407 → 1840
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:64 → 103
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:725 → 1026
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  4. XM_031578972.1 → XP_031434832.1  echinoderm microtubule-associated protein-like 6 isoform X2

    UniProtKB/TrEMBL
    A0A6P8GHD5
    Conserved Domains (4) summary
    COG2319
    Location:1404 → 1844
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:64 → 103
    7WD40; WD40 repeat [structural motif]
    pfam03451
    Location:2 → 48
    HELP; HELP motif
    cl29593
    Location:725 → 1026
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  5. XM_031578975.1 → XP_031434835.1  echinoderm microtubule-associated protein-like 6 isoform X4

    UniProtKB/TrEMBL
    A0A6P8GIX2
    Conserved Domains (4) summary
    COG2319
    Location:1402 → 1842
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:64 → 103
    7WD40; WD40 repeat [structural motif]
    pfam03451
    Location:2 → 48
    HELP; HELP motif
    cl29593
    Location:725 → 1026
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  6. XM_031578976.1 → XP_031434836.1  echinoderm microtubule-associated protein-like 6 isoform X6

    UniProtKB/TrEMBL
    A0A6P8GD40
    Conserved Domains (4) summary
    COG2319
    Location:1399 → 1839
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:64 → 103
    7WD40; WD40 repeat [structural motif]
    pfam03451
    Location:2 → 48
    HELP; HELP motif
    cl29593
    Location:725 → 1026
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  7. XM_012816984.2 → XP_012672438.1  echinoderm microtubule-associated protein-like 6 isoform X7

    UniProtKB/TrEMBL
    A0A6P3VIQ6
    Related
    ENSCHAP00020029652.1, ENSCHAT00020031908.1
    Conserved Domains (4) summary
    COG2319
    Location:1399 → 1832
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:64 → 103
    7WD40; WD40 repeat [structural motif]
    pfam03451
    Location:2 → 48
    HELP; HELP motif
    cl29593
    Location:725 → 1026
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  8. XM_042709482.1 → XP_042565416.1  echinoderm microtubule-associated protein-like 6 isoform X8

    UniProtKB/TrEMBL
    A0A8M1KMX8
    Conserved Domains (2) summary
    sd00039
    Location:64 → 103
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:725 → 1026
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  9. XM_042709483.1 → XP_042565417.1  echinoderm microtubule-associated protein-like 6 isoform X9

    UniProtKB/TrEMBL
    A0A8M1KNG1
    Conserved Domains (4) summary
    smart00320
    Location:1609 → 1649
    WD40; WD40 repeats
    COG2319
    Location:1084 → 1524
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:1383 → 1420
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:402 → 703
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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