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wdr36 WD repeat domain 36 [ Clupea harengus (Atlantic herring) ]

Gene ID: 105890741, updated on 13-Mar-2024

Summary

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Gene symbol
wdr36
Gene description
WD repeat domain 36
See related
EnsemblRapid:ENSCHAG00020017266
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 12
Exon count:
23
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 12 NC_045163.1 (13241894..13260934)

Chromosome 12 - NC_045163.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 232 Neighboring gene solute carrier family 25 member 46 Neighboring gene calcium/calmodulin-dependent protein kinase IV Neighboring gene potassium channel modulatory factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045163.1 Chromosome 12 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Pwp2p-containing subcomplex of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat-containing protein 36

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045163.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    13241894..13260934
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012816818.3 → XP_012672272.2  WD repeat-containing protein 36

    UniProtKB/TrEMBL
    A0A6P3VHT7
    Related
    ENSCHAP00020039116.1, ENSCHAT00020041995.1
    Conserved Domains (3) summary
    sd00039
    Location:442 → 481
    7WD40; WD40 repeat [structural motif]
    pfam04192
    Location:684 → 890
    Utp21; Utp21 specific WD40 associated putative domain
    cl29593
    Location:480 → 640
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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