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fbxo45 F-box protein 45 [ Clupea harengus (Atlantic herring) ]

Gene ID: 105889315, updated on 13-Mar-2024

Summary

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Gene symbol
fbxo45
Gene description
F-box protein 45
See related
EnsemblRapid:ENSCHAG00020010973
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 17
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 17 NC_045168.1 (10898673..10902410, complement)

Chromosome 17 - NC_045168.1Genomic Context describing neighboring genes Neighboring gene SH3-domain GRB2-like endophilin B1a Neighboring gene negative regulator of reactive oxygen species Neighboring gene family with sequence similarity 168 member B Neighboring gene Rho guanine nucleotide exchange factor (GEF) 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045168.1 Chromosome 17 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly involved in innervation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box/SPRY domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045168.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    10898673..10902410 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012815110.3 → XP_012670564.1  F-box/SPRY domain-containing protein 1

    UniProtKB/TrEMBL
    A0A6P3VF38
    Related
    ENSCHAP00020024129.1, ENSCHAT00020025663.1
    Conserved Domains (2) summary
    cd12907
    Location:112 → 286
    SPRY_Fbox; SPRY domain in the F-box family Fbxo45
    pfam12937
    Location:39 → 83
    F-box-like
Nucleotide Protein
Heading Accession and Version

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