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LRRC4C leucine rich repeat containing 4C [ Microcebus murinus (gray mouse lemur) ]

Gene ID: 105885654, updated on 13-Mar-2024

Summary

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Gene symbol
LRRC4C
Gene description
leucine rich repeat containing 4C
See related
Ensembl:ENSMICG00000047157
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcebus murinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
Orthologs
human mouse all
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Genomic context

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See LRRC4C in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Mmur_3.0 (GCF_000165445.2) 5 NC_033664.1 (24461278..24622315)
100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012195453.1 (6739933..6901062)

Chromosome 5 - NC_033664.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105885633 Neighboring gene uncharacterized LOC105885628 Neighboring gene uncharacterized LOC105885650 Neighboring gene zinc finger CCHC domain-containing protein 9 pseudogene Neighboring gene translationally-controlled tumor protein pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell-cell adhesion mediator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in modulation of chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic membrane adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in glutamatergic synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat-containing protein 4C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmur_3.0 Primary Assembly

Genomic

  1. NC_033664.1 Reference Mmur_3.0 Primary Assembly

    Range
    24461278..24622315
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012790840.2 → XP_012646294.1  leucine-rich repeat-containing protein 4C

    See identical proteins and their annotated locations for XP_012646294.1

    UniProtKB/TrEMBL
    A0A8B7I5Q3
    Conserved Domains (6) summary
    smart00013
    Location:47 → 80
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:301 → 339
    LRRCT; Leucine rich repeat C-terminal domain
    smart00409
    Location:360 → 443
    IG; Immunoglobulin
    sd00033
    Location:78 → 101
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:220 → 279
    LRR_8; Leucine rich repeat
    cd21340
    Location:65 → 235
    PPP1R42; protein phosphatase 1 regulatory subunit 42

  2. XM_012790810.1 → XP_012646264.1  leucine-rich repeat-containing protein 4C

    See identical proteins and their annotated locations for XP_012646264.1

    UniProtKB/TrEMBL
    A0A8B7I5Q3
    Conserved Domains (6) summary
    smart00013
    Location:47 → 80
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:301 → 339
    LRRCT; Leucine rich repeat C-terminal domain
    smart00409
    Location:360 → 443
    IG; Immunoglobulin
    sd00033
    Location:78 → 101
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:220 → 279
    LRR_8; Leucine rich repeat
    cd21340
    Location:65 → 235
    PPP1R42; protein phosphatase 1 regulatory subunit 42

  3. XM_012790821.1 → XP_012646275.1  leucine-rich repeat-containing protein 4C

    See identical proteins and their annotated locations for XP_012646275.1

    UniProtKB/TrEMBL
    A0A8B7I5Q3
    Conserved Domains (6) summary
    smart00013
    Location:47 → 80
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:301 → 339
    LRRCT; Leucine rich repeat C-terminal domain
    smart00409
    Location:360 → 443
    IG; Immunoglobulin
    sd00033
    Location:78 → 101
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:220 → 279
    LRR_8; Leucine rich repeat
    cd21340
    Location:65 → 235
    PPP1R42; protein phosphatase 1 regulatory subunit 42

  4. XM_012790785.1 → XP_012646239.1  leucine-rich repeat-containing protein 4C

    See identical proteins and their annotated locations for XP_012646239.1

    UniProtKB/TrEMBL
    A0A8B7I5Q3
    Conserved Domains (6) summary
    smart00013
    Location:47 → 80
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:301 → 339
    LRRCT; Leucine rich repeat C-terminal domain
    smart00409
    Location:360 → 443
    IG; Immunoglobulin
    sd00033
    Location:78 → 101
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:220 → 279
    LRR_8; Leucine rich repeat
    cd21340
    Location:65 → 235
    PPP1R42; protein phosphatase 1 regulatory subunit 42

  5. XM_012790830.1 → XP_012646284.1  leucine-rich repeat-containing protein 4C

    See identical proteins and their annotated locations for XP_012646284.1

    UniProtKB/TrEMBL
    A0A8B7I5Q3
    Conserved Domains (6) summary
    smart00013
    Location:47 → 80
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:301 → 339
    LRRCT; Leucine rich repeat C-terminal domain
    smart00409
    Location:360 → 443
    IG; Immunoglobulin
    sd00033
    Location:78 → 101
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:220 → 279
    LRR_8; Leucine rich repeat
    cd21340
    Location:65 → 235
    PPP1R42; protein phosphatase 1 regulatory subunit 42

  6. XM_020286504.1 → XP_020142093.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    A0A8B7I5Q3
    Conserved Domains (6) summary
    smart00013
    Location:47 → 80
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:301 → 339
    LRRCT; Leucine rich repeat C-terminal domain
    smart00409
    Location:360 → 443
    IG; Immunoglobulin
    sd00033
    Location:78 → 101
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:220 → 279
    LRR_8; Leucine rich repeat
    cd21340
    Location:65 → 235
    PPP1R42; protein phosphatase 1 regulatory subunit 42

  7. XM_020286505.1 → XP_020142094.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    A0A8B7I5Q3
    Related
    ENSMICP00000043033.1, ENSMICT00000060907.1
    Conserved Domains (6) summary
    smart00013
    Location:47 → 80
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:301 → 339
    LRRCT; Leucine rich repeat C-terminal domain
    smart00409
    Location:360 → 443
    IG; Immunoglobulin
    sd00033
    Location:78 → 101
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:220 → 279
    LRR_8; Leucine rich repeat
    cd21340
    Location:65 → 235
    PPP1R42; protein phosphatase 1 regulatory subunit 42

  8. XM_012790803.2 → XP_012646257.1  leucine-rich repeat-containing protein 4C

    See identical proteins and their annotated locations for XP_012646257.1

    UniProtKB/TrEMBL
    A0A8B7I5Q3
    Conserved Domains (6) summary
    smart00013
    Location:47 → 80
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:301 → 339
    LRRCT; Leucine rich repeat C-terminal domain
    smart00409
    Location:360 → 443
    IG; Immunoglobulin
    sd00033
    Location:78 → 101
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:220 → 279
    LRR_8; Leucine rich repeat
    cd21340
    Location:65 → 235
    PPP1R42; protein phosphatase 1 regulatory subunit 42
Nucleotide Protein
Heading Accession and Version

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