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TENT4B terminal nucleotidyltransferase 4B [ Microcebus murinus (gray mouse lemur) ]

Gene ID: 105884746, updated on 13-Mar-2024

Summary

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Gene symbol
TENT4B
Gene description
terminal nucleotidyltransferase 4B
See related
Ensembl:ENSMICG00000027866
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcebus murinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
Also known as
PAPD5
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
15
Annotation release Status Assembly Chr Location
101 current Mmur_3.0 (GCF_000165445.2) 20 NC_033679.1 (63949365..64047364, complement)
100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012198441.1 (362644..460489, complement)

Chromosome 20 - NC_033679.1Genomic Context describing neighboring genes Neighboring gene bromodomain containing 7 Neighboring gene adenylate cyclase 7 Neighboring gene survival of motor neuron-related-splicing factor 30 pseudogene Neighboring gene translation initiation factor IF-2-like Neighboring gene HEAT repeat containing 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables poly(A) RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TRAMP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
non-canonical poly(A) RNA polymerase PAPD5
Names
poly(A) RNA polymerase D5, non-canonical

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmur_3.0 Primary Assembly

Genomic

  1. NC_033679.1 Reference Mmur_3.0 Primary Assembly

    Range
    63949365..64047364 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012788960.2 → XP_012644414.1  non-canonical poly(A) RNA polymerase PAPD5 isoform X2

    UniProtKB/TrEMBL
    A0A8B7I1B3, A0A8C5XMD8
    Conserved Domains (2) summary
    cd05402
    Location:222 → 332
    NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
    pfam03828
    Location:390 → 450
    PAP_assoc; Cid1 family poly A polymerase

  2. XM_012788961.2 → XP_012644415.1  non-canonical poly(A) RNA polymerase PAPD5 isoform X3

    UniProtKB/TrEMBL
    A0A8B7I1A7, A0A8C5XMD8
    Conserved Domains (2) summary
    cd05402
    Location:222 → 332
    NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
    pfam03828
    Location:390 → 450
    PAP_assoc; Cid1 family poly A polymerase

  3. XM_012788962.1 → XP_012644416.1  non-canonical poly(A) RNA polymerase PAPD5 isoform X4

    UniProtKB/TrEMBL
    A0A8B7I453, A0A8C5XMD8
    Conserved Domains (2) summary
    cd05402
    Location:222 → 332
    NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
    pfam03828
    Location:390 → 450
    PAP_assoc; Cid1 family poly A polymerase

  4. XM_012788959.2 → XP_012644413.1  non-canonical poly(A) RNA polymerase PAPD5 isoform X1

    UniProtKB/TrEMBL
    A0A8B7I1B0, A0A8C5XMD8
    Related
    ENSMICP00000037107.2, ENSMICT00000032031.2
    Conserved Domains (2) summary
    cd05402
    Location:222 → 332
    NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
    pfam03828
    Location:390 → 450
    PAP_assoc; Cid1 family poly A polymerase

RNA

  1. XR_001160338.2 RNA Sequence

Nucleotide Protein
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