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CACTIN cactin, spliceosome C complex subunit [ Microcebus murinus (gray mouse lemur) ]

Gene ID: 105873951, updated on 13-Mar-2024

Summary

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Gene symbol
CACTIN
Gene description
cactin, spliceosome C complex subunit
See related
Ensembl:ENSMICG00000008291
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcebus murinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 24
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Mmur_3.0 (GCF_000165445.2) 24 NC_033683.1 (12279493..12292600, complement)
100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012196242.1 (1111203..1125227)

Chromosome 24 - NC_033683.1Genomic Context describing neighboring genes Neighboring gene GIPC PDZ domain containing family member 3 Neighboring gene thromboxane A2 receptor Neighboring gene phosphatidylinositol-4-phosphate 5-kinase type 1 gamma Neighboring gene tight junction protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA cis splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cactin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmur_3.0 Primary Assembly

Genomic

  1. NC_033683.1 Reference Mmur_3.0 Primary Assembly

    Range
    12279493..12292600 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012769315.2 → XP_012624769.1  cactin

    UniProtKB/TrEMBL
    A0A8B7GP31, A0A8C5UW10
    Related
    ENSMICP00000007560.3, ENSMICT00000008299.3
    Conserved Domains (3) summary
    pfam09732
    Location:636 → 760
    CactinC_cactus; Cactus-binding C-terminus of cactin protein
    pfam10312
    Location:274 → 459
    Cactin_mid; Conserved mid region of cactin
    pfam14738
    Location:228 → 308
    PaaSYMP; Solute carrier (proton/amino acid symporter), TRAMD3 or PAT1
Nucleotide Protein
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