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PCDH10 protocadherin 10 [ Microcebus murinus (gray mouse lemur) ]

Gene ID: 105872373, updated on 13-Mar-2024

Summary

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Gene symbol
PCDH10
Gene description
protocadherin 10
See related
Ensembl:ENSMICG00000008070
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcebus murinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Mmur_3.0 (GCF_000165445.2) 14 NC_033673.1 (66181685..66235939, complement)
100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012196008.1 (5404903..5459157, complement)

Chromosome 14 - NC_033673.1Genomic Context describing neighboring genes Neighboring gene poly(A) binding protein cytoplasmic 4 like Neighboring gene uncharacterized LOC105872372 Neighboring gene uncharacterized LOC105872374 Neighboring gene uncharacterized LOC109729243

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protocadherin-10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmur_3.0 Primary Assembly

Genomic

  1. NC_033673.1 Reference Mmur_3.0 Primary Assembly

    Range
    66181685..66235939 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012766316.1 → XP_012621770.1  protocadherin-10 isoform X1

    UniProtKB/TrEMBL
    A0A8B7GG76, A0A8C5Y103
    Related
    ENSMICP00000044267.1, ENSMICT00000061985.1
    Conserved Domains (3) summary
    cd11304
    Location:253 → 353
    Cadherin_repeat; Cadherin tandem repeat domain
    pfam08266
    Location:19 → 101
    Cadherin_2; Cadherin-like
    pfam16492
    Location:712 → 837
    Cadherin_C_2; Cadherin cytoplasmic C-terminal

  2. XM_012766317.1 → XP_012621771.1  protocadherin-10 isoform X2

    UniProtKB/TrEMBL
    A0A8B7GG90, A0A8C5Y103
    Related
    ENSMICP00000007354.2, ENSMICT00000008071.3
    Conserved Domains (3) summary
    cd11304
    Location:253 → 353
    Cadherin_repeat; Cadherin tandem repeat domain
    pfam08266
    Location:19 → 101
    Cadherin_2; Cadherin-like
    pfam16492
    Location:712 → 837
    Cadherin_C_2; Cadherin cytoplasmic C-terminal
Nucleotide Protein
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