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EPHB6 EPH receptor B6 [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105827073, updated on 11-Apr-2024

Summary

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Gene symbol
EPHB6
Gene description
EPH receptor B6
See related
Ensembl:ENSPCOG00000018084
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012155951.1 (166859..174619, complement)

NW_012155951.1Genomic Context describing neighboring genes Neighboring gene transient receptor potential cation channel subfamily V member 5 Neighboring gene transient receptor potential cation channel subfamily V member 6 Neighboring gene T-cell receptor beta chain V region LB2-like Neighboring gene T-cell receptor beta-1 chain C region-like Neighboring gene T-cell receptor beta-1 chain C region-like Neighboring gene serine protease 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012155951.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane-ephrin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in central nervous system projection neuron axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ephrin type-B receptor 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012155951.1 Reference Pcoq_1.0 Primary Assembly

    Range
    166859..174619 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012665094.1 → XP_012520548.1  ephrin type-B receptor 6 isoform X2

    Conserved Domains (8) summary
    cd09555
    Location:652 → 720
    SAM_EPH-B6; SAM domain of EPH-B6 subfamily of tyrosine kinase receptors
    smart00454
    Location:653 → 719
    SAM; Sterile alpha motif
    cd00063
    Location:195 → 286
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00185
    Location:9 → 75
    TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
    pfam00041
    Location:79 → 178
    fn3; Fibronectin type III domain
    pfam07714
    Location:377 → 622
    Pkinase_Tyr; Protein tyrosine kinase
    pfam14575
    Location:319 → 372
    EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
    cl21453
    Location:372 → 626
    PKc_like; Protein Kinases, catalytic domain

  2. XM_012665093.1 → XP_012520547.1  ephrin type-B receptor 6 isoform X1

    UniProtKB/TrEMBL
    A0A2K6FG54
    Related
    ENSPCOP00000012957.1, ENSPCOT00000023560.1
    Conserved Domains (9) summary
    cd09555
    Location:943 → 1011
    SAM_EPH-B6; SAM domain of EPH-B6 subfamily of tyrosine kinase receptors
    smart00454
    Location:944 → 1010
    SAM; Sterile alpha motif
    cd10475
    Location:33 → 230
    EphR_LBD_B6; Ligand Binding Domain of Ephrin type-B Receptor 6
    cd00063
    Location:486 → 577
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00185
    Location:300 → 366
    TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
    pfam00041
    Location:370 → 469
    fn3; Fibronectin type III domain
    pfam07714
    Location:668 → 913
    Pkinase_Tyr; Protein tyrosine kinase
    pfam14575
    Location:610 → 663
    EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
    cl21453
    Location:663 → 917
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

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