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EFHC1 EF-hand domain containing 1 [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105813768, updated on 13-Mar-2024

Summary

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Gene symbol
EFHC1
Gene description
EF-hand domain containing 1
See related
Ensembl:ENSPCOG00000026614
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See EFHC1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012148507.1 (1953122..2056850, complement)

NW_012148507.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 14A Neighboring gene translocation associated membrane protein 2 Neighboring gene progestin and adipoQ receptor family member 8 Neighboring gene minichromosome maintenance complex component 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012148507.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium-dependent cell motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic spindle organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitotic spindle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EF-hand domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012148507.1 Reference Pcoq_1.0 Primary Assembly

    Range
    1953122..2056850 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012648548.1 → XP_012504002.1  EF-hand domain-containing protein 1

    UniProtKB/TrEMBL
    A0A2K6GPC2
    Related
    ENSPCOP00000028064.1, ENSPCOT00000038937.1
    Conserved Domains (4) summary
    smart00676
    Location:92 → 212
    DM10; Domains in hypothetical proteins in Drosophila, C. elegans and mammals. Occurs singly in some nucleoside diphosphate kinases
    cd00051
    Location:432 → 492
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam06565
    Location:292 → 324
    DUF1126; Repeat of unknown function (DUF1126)
    pfam13499
    Location:432 → 491
    EF-hand_7; EF-hand domain pair
Nucleotide Protein
Heading Accession and Version

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