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ZBTB18 zinc finger and BTB domain containing 18 [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105810411, updated on 13-Mar-2024

Summary

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Gene symbol
ZBTB18
Gene description
zinc finger and BTB domain containing 18
See related
Ensembl:ENSPCOG00000027655
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012146079.1 (3187864..3196621)

NW_012146079.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase Topors pseudogene Neighboring gene SHH signaling and ciliogenesis regulator SDCCAG8 Neighboring gene AKT serine/threonine kinase 3 Neighboring gene cathepsin L1 pseudogene Neighboring gene sperm microtubule inner protein 3 Neighboring gene adenylosuccinate synthase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012146079.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012146079.1 Reference Pcoq_1.0 Primary Assembly

    Range
    3187864..3196621
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012644404.1 → XP_012499858.1  zinc finger and BTB domain-containing protein 18 isoform X2

    See identical proteins and their annotated locations for XP_012499858.1

    Conserved Domains (5) summary
    smart00225
    Location:25 → 110
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:294 → 481
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:412 → 432
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:14 → 110
    BTB; BTB/POZ domain
    pfam13465
    Location:425 → 447
    zf-H2C2_2; Zinc-finger double domain

  2. XM_012644403.1 → XP_012499857.1  zinc finger and BTB domain-containing protein 18 isoform X1

    See identical proteins and their annotated locations for XP_012499857.1

    UniProtKB/TrEMBL
    A0A2K6GUG7
    Related
    ENSPCOP00000029900.1, ENSPCOT00000040846.1
    Conserved Domains (5) summary
    smart00225
    Location:34 → 119
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:303 → 490
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:421 → 441
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:23 → 119
    BTB; BTB/POZ domain
    pfam13465
    Location:434 → 456
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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