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LRRC4C leucine rich repeat containing 4C [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105809029, updated on 13-Mar-2024

Summary

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Gene symbol
LRRC4C
Gene description
leucine rich repeat containing 4C
See related
Ensembl:ENSPCOG00000025428
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012143523.1 (66141..294186)

NW_012143523.1Genomic Context describing neighboring genes Neighboring gene zinc finger CCHC domain-containing protein 9 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012143523.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell-cell adhesion mediator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in modulation of chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic membrane adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in glutamatergic synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat-containing protein 4C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012143523.1 Reference Pcoq_1.0 Primary Assembly

    Range
    66141..294186
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012642791.1 → XP_012498245.1  leucine-rich repeat-containing protein 4C

    See identical proteins and their annotated locations for XP_012498245.1

    UniProtKB/TrEMBL
    A0A2K6GIX5
    Conserved Domains (6) summary
    smart00013
    Location:47 → 80
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:301 → 339
    LRRCT; Leucine rich repeat C-terminal domain
    smart00409
    Location:360 → 443
    IG; Immunoglobulin
    sd00033
    Location:78 → 101
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:220 → 279
    LRR_8; Leucine rich repeat
    cd21340
    Location:65 → 235
    PPP1R42; protein phosphatase 1 regulatory subunit 42

  2. XM_012642792.1 → XP_012498246.1  leucine-rich repeat-containing protein 4C

    See identical proteins and their annotated locations for XP_012498246.1

    UniProtKB/TrEMBL
    A0A2K6GIX5
    Related
    ENSPCOP00000026191.1, ENSPCOT00000036918.1
    Conserved Domains (6) summary
    smart00013
    Location:47 → 80
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:301 → 339
    LRRCT; Leucine rich repeat C-terminal domain
    smart00409
    Location:360 → 443
    IG; Immunoglobulin
    sd00033
    Location:78 → 101
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:220 → 279
    LRR_8; Leucine rich repeat
    cd21340
    Location:65 → 235
    PPP1R42; protein phosphatase 1 regulatory subunit 42
Nucleotide Protein
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