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LOC105800613 ethylene-responsive transcription factor ERF096 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105800613, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105800613
Gene description
ethylene-responsive transcription factor ERF096
Locus tag
B456_006G249900
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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Location:
chromosome: 9
Exon count:
1
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 9 NC_068573.1 (48281120..48281527)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 6 NC_026934.1 (49408921..49409403)

Chromosome 9 - NC_068573.1Genomic Context describing neighboring genes Neighboring gene RING-H2 finger protein ATL16 Neighboring gene ethylene-responsive transcription factor ERF096 Neighboring gene ethylene-responsive transcription factor ERF096 Neighboring gene ethylene-responsive transcription factor ERF096

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ethylene-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethylene-responsive transcription factor ERF096

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068573.1 Reference ASM2569854v1 Primary Assembly

    Range
    48281120..48281527
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012631830.2 → XP_012487284.1  ethylene-responsive transcription factor ERF096

    See identical proteins and their annotated locations for XP_012487284.1

    UniProtKB/TrEMBL
    A0A0D2NY49
    Conserved Domains (1) summary
    smart00380
    Location:20 → 79
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Nucleotide Protein
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