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LOC105788779 dehydration-responsive element-binding protein 3 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105788779, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105788779
Gene description
dehydration-responsive element-binding protein 3
Locus tag
B456_001G008100
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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Location:
chromosome: 7
Exon count:
1
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 7 NC_068571.1 (52773784..52774886, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 1 NC_026929.1 (737234..738385)

Chromosome 7 - NC_068571.1Genomic Context describing neighboring genes Neighboring gene nuclear pore complex protein NUP214-like Neighboring gene protein unc-13 homolog Neighboring gene uncharacterized LOC105788608 Neighboring gene probable glycosyltransferase At3g07620

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dehydration-responsive element-binding protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068571.1 Reference ASM2569854v1 Primary Assembly

    Range
    52773784..52774886 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012615855.2 → XP_012471309.1  dehydration-responsive element-binding protein 3

    See identical proteins and their annotated locations for XP_012471309.1

    UniProtKB/TrEMBL
    A0A0D2PRS4
    Conserved Domains (1) summary
    smart00380
    Location:52 → 113
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Nucleotide Protein
Heading Accession and Version

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