U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105768232 transcription factor ILR3 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105768232, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC105768232
Gene description
transcription factor ILR3
Locus tag
B456_009G175900
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 5 NC_068569.1 (13725290..13727341)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 9 NC_026937.1 (13620022..13625328)

Chromosome 5 - NC_068569.1Genomic Context describing neighboring genes Neighboring gene kinesin-like protein KIN-14C Neighboring gene thioredoxin-like protein CXXS1 Neighboring gene sulfite exporter TauE/SafE family protein 5-like Neighboring gene cysteine-rich receptor-like protein kinase 25

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transcription factor ILR3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068569.1 Reference ASM2569854v1 Primary Assembly

    Range
    13725290..13727341
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012588051.2 → XP_012443505.1  transcription factor ILR3

    See identical proteins and their annotated locations for XP_012443505.1

    UniProtKB/TrEMBL
    A0A0D2TRM8
    Conserved Domains (2) summary
    smart00353
    Location:97 → 146
    HLH; helix loop helix domain
    pfam06005
    Location:137 → 189
    DUF904; Protein of unknown function (DUF904)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases