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LOC105762775 zinc finger protein ZAT10 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105762775, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105762775
Gene description
zinc finger protein ZAT10
Locus tag
B456_008G020700
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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Location:
chromosome: 12
Exon count:
1
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 12 NC_068576.1 (2385942..2387048)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 8 NC_026936.1 (2370322..2371459)

Chromosome 12 - NC_068576.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128035567 Neighboring gene uncharacterized LOC105762774 Neighboring gene 40S ribosomal protein S29 Neighboring gene leucine-rich repeat protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein ZAT10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068576.1 Reference ASM2569854v1 Primary Assembly

    Range
    2385942..2387048
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012580668.2 → XP_012436122.1  zinc finger protein ZAT10

    See identical proteins and their annotated locations for XP_012436122.1

    UniProtKB/TrEMBL
    A0A0D2R7A3
    Conserved Domains (2) summary
    sd00017
    Location:87 → 107
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13912
    Location:85 → 110
    zf-C2H2_6; C2H2-type zinc finger
Nucleotide Protein
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