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SYN1 synapsin I [ Aotus nancymaae (Ma's night monkey) ]

Gene ID: 105734539, updated on 12-Apr-2024

Summary

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Gene symbol
SYN1
Gene description
synapsin I
See related
Ensembl:ENSANAG00000031817
Gene type
protein coding
RefSeq status
MODEL
Organism
Aotus nancymaae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Aotidae; Aotus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_04 current 86718_ANA_hifiasm-v0.15.2.pri (GCF_030222135.1) Unplaced Scaffold NW_026988472.1 (11255281..11304848)
101 previous assembly Anan_2.0 (GCF_000952055.2) Unplaced Scaffold NW_018507568.1 (627784..677334, complement)

NW_026988472.1Genomic Context describing neighboring genes Neighboring gene ETS transcription factor ELK1 Neighboring gene complement factor properdin Neighboring gene TIMP metallopeptidase inhibitor 1 Neighboring gene A-Raf proto-oncogene, serine/threonine kinase Neighboring gene small ribosomal subunit protein eS17-like Neighboring gene small nucleolar RNA SNORA51 Neighboring gene zinc finger protein 41

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neurotransmitter secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synapsin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030222135.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

Genomic

  1. NW_026988472.1 Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

    Range
    11255281..11304848
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012477381.3 → XP_012332804.1  synapsin-1 isoform X1

    UniProtKB/TrEMBL
    A0A2K5E4L4
    Related
    ENSANAP00000028084.1
    Conserved Domains (3) summary
    pfam02078
    Location:115 → 212
    Synapsin; Synapsin, N-terminal domain
    pfam10581
    Location:1 → 27
    Synapsin_N; Synapsin N-terminal
    cl17255
    Location:214 → 416
    ATP-grasp_4; ATP-grasp domain

  2. XM_012477382.3 → XP_012332805.1  synapsin-1 isoform X2

    UniProtKB/TrEMBL
    A0A2K5E4L4
    Conserved Domains (3) summary
    pfam02078
    Location:115 → 212
    Synapsin; Synapsin, N-terminal domain
    pfam10581
    Location:1 → 27
    Synapsin_N; Synapsin N-terminal
    cl17255
    Location:214 → 416
    ATP-grasp_4; ATP-grasp domain
Nucleotide Protein
Heading Accession and Version

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