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SOX8 SRY-box transcription factor 8 [ Aotus nancymaae (Ma's night monkey) ]

Gene ID: 105728392, updated on 12-Apr-2024

Summary

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Gene symbol
SOX8
Gene description
SRY-box transcription factor 8
See related
Ensembl:ENSANAG00000032947
Gene type
protein coding
RefSeq status
MODEL
Organism
Aotus nancymaae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Aotidae; Aotus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_04 current 86718_ANA_hifiasm-v0.15.2.pri (GCF_030222135.1) Unplaced Scaffold NW_026988463.1 (995219..998642)
101 previous assembly Anan_2.0 (GCF_000952055.2) Unplaced Scaffold NW_018488230.1 (360975..364398, complement)

NW_026988463.1Genomic Context describing neighboring genes Neighboring gene G protein subunit gamma 13 Neighboring gene lipase maturation factor 1 Neighboring gene lipase maturation factor 1-like Neighboring gene C1q and TNF related 8 Neighboring gene somatostatin receptor 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in enteric nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in morphogenesis of an epithelium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neural crest cell development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peripheral nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor SOX-8
Names
SRY-box 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030222135.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

Genomic

  1. NW_026988463.1 Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

    Range
    995219..998642
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012468760.2 → XP_012324183.1  transcription factor SOX-8

    UniProtKB/TrEMBL
    A0A2K5EAW4
    Related
    ENSANAP00000030373.1
    Conserved Domains (2) summary
    cd01388
    Location:101 → 171
    SOX-TCF_HMG-box; SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and ...
    pfam12444
    Location:18 → 89
    Sox_N; Sox developmental protein N terminal
Nucleotide Protein
Heading Accession and Version

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