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MATN4 matrilin 4 [ Aotus nancymaae (Ma's night monkey) ]

Gene ID: 105727450, updated on 15-Apr-2024

Summary

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Gene symbol
MATN4
Gene description
matrilin 4
See related
Ensembl:ENSANAG00000028420
Gene type
protein coding
RefSeq status
MODEL
Organism
Aotus nancymaae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Aotidae; Aotus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_04 current 86718_ANA_hifiasm-v0.15.2.pri (GCF_030222135.1) Unplaced Scaffold NW_026988442.1 (24820941..24837155, complement)
101 previous assembly Anan_2.0 (GCF_000952055.2) Unplaced Scaffold NW_018513626.1 (2838549..2854985, complement)

NW_026988442.1Genomic Context describing neighboring genes Neighboring gene semenogelin 1 Neighboring gene secretory leukocyte peptidase inhibitor Neighboring gene recombination signal binding protein for immunoglobulin kappa J region like Neighboring gene syndecan 4 Neighboring gene SYS1 golgi trafficking protein Neighboring gene TP53 target 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
matrilin-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030222135.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

Genomic

  1. NW_026988442.1 Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

    Range
    24820941..24837155 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012467282.3 → XP_012322705.1  matrilin-4

    See identical proteins and their annotated locations for XP_012322705.1

    UniProtKB/TrEMBL
    A0A2K5DJW6, A0A2K5DK35
    Related
    ENSANAP00000021267.1
    Conserved Domains (3) summary
    cd01475
    Location:30 → 252
    vWA_Matrilin; VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. ...
    pfam14670
    Location:259 → 294
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl00057
    Location:382 → 618
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

  2. XM_012467281.3 → XP_012322704.1  matrilin-4

    See identical proteins and their annotated locations for XP_012322704.1

    UniProtKB/TrEMBL
    A0A2K5DJW6, A0A2K5DK35
    Conserved Domains (3) summary
    cd01475
    Location:30 → 252
    vWA_Matrilin; VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. ...
    pfam14670
    Location:259 → 294
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl00057
    Location:382 → 618
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

  3. XM_012467280.3 → XP_012322703.1  matrilin-4

    See identical proteins and their annotated locations for XP_012322703.1

    UniProtKB/TrEMBL
    A0A2K5DJW6, A0A2K5DK35
    Conserved Domains (3) summary
    cd01475
    Location:30 → 252
    vWA_Matrilin; VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. ...
    pfam14670
    Location:259 → 294
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl00057
    Location:382 → 618
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

  4. XM_012467274.3 → XP_012322697.1  matrilin-4

    See identical proteins and their annotated locations for XP_012322697.1

    UniProtKB/TrEMBL
    A0A2K5DJW6, A0A2K5DK35
    Conserved Domains (3) summary
    cd01475
    Location:30 → 252
    vWA_Matrilin; VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. ...
    pfam14670
    Location:259 → 294
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl00057
    Location:382 → 618
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

  5. XM_064382472.1 → XP_064238542.1  matrilin-4

  6. XM_064382471.1 → XP_064238541.1  matrilin-4

  7. XM_064382470.1 → XP_064238540.1  matrilin-4

  8. XM_064382469.1 → XP_064238539.1  matrilin-4

  9. XM_064382468.1 → XP_064238538.1  matrilin-4

Nucleotide Protein
Heading Accession and Version

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