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LIN9 lin-9 DREAM MuvB core complex component [ Aotus nancymaae (Ma's night monkey) ]

Gene ID: 105722325, updated on 12-Apr-2024

Summary

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Gene symbol
LIN9
Gene description
lin-9 DREAM MuvB core complex component
See related
Ensembl:ENSANAG00000004587
Gene type
protein coding
RefSeq status
MODEL
Organism
Aotus nancymaae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Aotidae; Aotus
Orthologs
human mouse all
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Genomic context

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See LIN9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_04 current 86718_ANA_hifiasm-v0.15.2.pri (GCF_030222135.1) Unplaced Scaffold NW_026988445.1 (13381094..13459679, complement)
101 previous assembly Anan_2.0 (GCF_000952055.2) Unplaced Scaffold NW_018505794.1 (9440159..9518736)

NW_026988445.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA binding domain containing 3 Neighboring gene small ribosomal subunit protein uS8-like Neighboring gene Mix paired-like homeobox Neighboring gene small nucleolar RNA U13 Neighboring gene small nucleolar RNA U13 Neighboring gene signal peptidase complex subunit 3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription repressor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein lin-9 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030222135.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

Genomic

  1. NW_026988445.1 Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

    Range
    13381094..13459679 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012459809.2 → XP_012315232.1  protein lin-9 homolog isoform X1

    UniProtKB/TrEMBL
    A0A2K5BW00, A0A2K5BW21
    Related
    ENSANAP00000000608.1
    Conserved Domains (1) summary
    pfam06584
    Location:143 → 247
    DIRP; DIRP

  2. XM_012459810.2 → XP_012315233.1  protein lin-9 homolog isoform X2

    UniProtKB/TrEMBL
    A0A2K5BVZ1, A0A2K5BW21
    Related
    ENSANAP00000000610.1
    Conserved Domains (1) summary
    pfam06584
    Location:108 → 212
    DIRP; DIRP

  3. XM_064383571.1 → XP_064239641.1  protein lin-9 homolog isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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