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SAP30L SAP30 like [ Aotus nancymaae (Ma's night monkey) ]

Gene ID: 105718637, updated on 12-Apr-2024

Summary

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Gene symbol
SAP30L
Gene description
SAP30 like
See related
Ensembl:ENSANAG00000032719
Gene type
protein coding
RefSeq status
MODEL
Organism
Aotus nancymaae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Aotidae; Aotus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_04 current 86718_ANA_hifiasm-v0.15.2.pri (GCF_030222135.1) Unplaced Scaffold NW_026988479.1 (29492178..29507756)
101 previous assembly Anan_2.0 (GCF_000952055.2) Unplaced Scaffold NW_018505940.1 (559425..575043, complement)

NW_026988479.1Genomic Context describing neighboring genes Neighboring gene polypeptide N-acetylgalactosaminyltransferase 10 Neighboring gene U1 spliceosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene vacuolar protein sorting-associated protein 37A-like Neighboring gene heart and neural crest derivatives expressed 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone deacetylase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone deacetylase complex subunit SAP30L

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030222135.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

Genomic

  1. NW_026988479.1 Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

    Range
    29492178..29507756
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012454719.2 → XP_012310142.1  histone deacetylase complex subunit SAP30L

    See identical proteins and their annotated locations for XP_012310142.1

    UniProtKB/TrEMBL
    A0A2K5E9K6
    Related
    ENSANAP00000029918.1
    Conserved Domains (2) summary
    pfam13866
    Location:23 → 94
    zf-SAP30; SAP30 zinc-finger
    pfam13867
    Location:113 → 165
    SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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