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HACD4 3-hydroxyacyl-CoA dehydratase 4 [ Aotus nancymaae (Ma's night monkey) ]

Gene ID: 105715579, updated on 12-Apr-2024

Summary

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Gene symbol
HACD4
Gene description
3-hydroxyacyl-CoA dehydratase 4
See related
Ensembl:ENSANAG00000027847
Gene type
protein coding
RefSeq status
MODEL
Organism
Aotus nancymaae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Aotidae; Aotus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_04 current 86718_ANA_hifiasm-v0.15.2.pri (GCF_030222135.1) Unplaced Scaffold NW_026988414.1 (50746618..50795448)
101 previous assembly Anan_2.0 (GCF_000952055.2) Unplaced Scaffold NW_018503729.1 (3907739..3943324, complement)

NW_026988414.1Genomic Context describing neighboring genes Neighboring gene interferon omega 1 Neighboring gene interferon beta 1 Neighboring gene focadhesin Neighboring gene small nucleolar RNA SNORA30/SNORA37 family Neighboring gene keratin, type II cytoskeletal 8-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-hydroxyacyl-CoA dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030222135.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

Genomic

  1. NW_026988414.1 Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

    Range
    50746618..50795448
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012450003.2 → XP_012305426.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X2

    UniProtKB/TrEMBL
    A0A2K5DGS9
    Related
    ENSANAP00000020151.1
    Conserved Domains (1) summary
    pfam04387
    Location:65 → 222
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

  2. XM_012450002.2 → XP_012305425.2  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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