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HNRNPD heterogeneous nuclear ribonucleoprotein D [ Aotus nancymaae (Ma's night monkey) ]

Gene ID: 105713302, updated on 19-Apr-2024

Summary

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Gene symbol
HNRNPD
Gene description
heterogeneous nuclear ribonucleoprotein D
See related
Ensembl:ENSANAG00000035221
Gene type
protein coding
RefSeq status
MODEL
Organism
Aotus nancymaae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Aotidae; Aotus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_04 current 86718_ANA_hifiasm-v0.15.2.pri (GCF_030222135.1) Unplaced Scaffold NW_026988417.1 (75226385..75255151, complement)
101 previous assembly Anan_2.0 (GCF_000952055.2) Unplaced Scaffold NW_018490587.1 (1583951..1604905)

NW_026988417.1Genomic Context describing neighboring genes Neighboring gene prohibitin 1-like Neighboring gene cyclin-dependent kinase 4 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC135271386 Neighboring gene uncharacterized LOC105713271

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heterogeneous nuclear ribonucleoprotein D0

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030222135.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

Genomic

  1. NW_026988417.1 Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

    Range
    75226385..75255151 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012446938.3 → XP_012302361.1  heterogeneous nuclear ribonucleoprotein D0 isoform X4

    Conserved Domains (3) summary
    cd12575
    Location:80 → 153
    RRM1_hnRNPD_like; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein hnRNP D0, hnRNP A/B, hnRNP DL and similar proteins
    cd12583
    Location:164 → 238
    RRM2_hnRNPD; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) and similar proteins
    pfam08143
    Location:57 → 78
    CBFNT; CBFNT (NUC161) domain

  2. XM_012446936.3 → XP_012302359.1  heterogeneous nuclear ribonucleoprotein D0 isoform X2

    UniProtKB/TrEMBL
    A0A2K5EQL9
    Related
    ENSANAP00000035521.1
    Conserved Domains (3) summary
    cd12575
    Location:80 → 153
    RRM1_hnRNPD_like; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein hnRNP D0, hnRNP A/B, hnRNP DL and similar proteins
    cd12583
    Location:164 → 238
    RRM2_hnRNPD; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) and similar proteins
    pfam08143
    Location:57 → 78
    CBFNT; CBFNT (NUC161) domain

  3. XM_012446937.3 → XP_012302360.1  heterogeneous nuclear ribonucleoprotein D0 isoform X3

    UniProtKB/TrEMBL
    A0A2K5EQP9
    Related
    ENSANAP00000035522.1
    Conserved Domains (3) summary
    cd12575
    Location:99 → 172
    RRM1_hnRNPD_like; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein hnRNP D0, hnRNP A/B, hnRNP DL and similar proteins
    cd12583
    Location:183 → 257
    RRM2_hnRNPD; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) and similar proteins
    pfam08143
    Location:57 → 78
    CBFNT; CBFNT (NUC161) domain

  4. XM_012446935.3 → XP_012302358.1  heterogeneous nuclear ribonucleoprotein D0 isoform X1

    UniProtKB/TrEMBL
    A0A2K5EQM8
    Related
    ENSANAP00000035507.1
    Conserved Domains (3) summary
    cd12575
    Location:99 → 172
    RRM1_hnRNPD_like; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein hnRNP D0, hnRNP A/B, hnRNP DL and similar proteins
    cd12583
    Location:183 → 257
    RRM2_hnRNPD; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) and similar proteins
    pfam08143
    Location:57 → 78
    CBFNT; CBFNT (NUC161) domain

  5. XM_064368400.1 → XP_064224470.1  heterogeneous nuclear ribonucleoprotein D0 isoform X1

Nucleotide Protein
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