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SCAPER S-phase cyclin A associated protein in the ER [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105601333, updated on 13-Mar-2024

Summary

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Gene symbol
SCAPER
Gene description
S-phase cyclin A associated protein in the ER
See related
Ensembl:ENSCATG00000039987
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
40
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012002799.1 (586303..1138024, complement)

NW_012002799.1Genomic Context describing neighboring genes Neighboring gene tyrosine-protein kinase receptor TYRO3-like Neighboring gene electron transfer flavoprotein subunit alpha Neighboring gene ISL LIM homeobox 2 Neighboring gene uncharacterized LOC105601332 Neighboring gene keratin, type II cytoskeletal 8 pseudogene Neighboring gene reticulocalbin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012002799.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
S phase cyclin A-associated protein in the endoplasmic reticulum

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012002799.1 Reference Caty_1.0

    Range
    586303..1138024 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012093487.1 → XP_011948877.1  S phase cyclin A-associated protein in the endoplasmic reticulum isoform X4

    UniProtKB/TrEMBL
    A0A2K5N9G6
    Related
    ENSCATP00000034132.1, ENSCATT00000058408.1
    Conserved Domains (5) summary
    smart00451
    Location:789 → 821
    ZnF_U1; U1-like zinc finger
    pfam00836
    Location:529 → 625
    Stathmin; Stathmin family
    pfam16501
    Location:88 → 182
    SCAPER_N; S phase cyclin A-associated protein in the endoplasmic reticulum
    cd16269
    Location:759 → 769
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:669 → 773
    GBP_C; Guanylate-binding protein, C-terminal domain

  2. XM_012093486.1 → XP_011948876.1  S phase cyclin A-associated protein in the endoplasmic reticulum isoform X3

    UniProtKB/TrEMBL
    A0A2K5N9G6
    Conserved Domains (5) summary
    smart00451
    Location:791 → 823
    ZnF_U1; U1-like zinc finger
    pfam00836
    Location:531 → 627
    Stathmin; Stathmin family
    pfam16501
    Location:90 → 184
    SCAPER_N; S phase cyclin A-associated protein in the endoplasmic reticulum
    cd16269
    Location:761 → 771
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:671 → 775
    GBP_C; Guanylate-binding protein, C-terminal domain

  3. XM_012093481.1 → XP_011948871.1  S phase cyclin A-associated protein in the endoplasmic reticulum isoform X2

    See identical proteins and their annotated locations for XP_011948871.1

    UniProtKB/TrEMBL
    A0A2K5N9G6
    Conserved Domains (6) summary
    pfam07909
    Location:408 → 912
    DUF1663; Protein of unknown function (DUF1663)
    smart00451
    Location:795 → 827
    ZnF_U1; U1-like zinc finger
    pfam00836
    Location:534 → 631
    Stathmin; Stathmin family
    pfam16501
    Location:88 → 182
    SCAPER_N; S phase cyclin A-associated protein in the endoplasmic reticulum
    cd16269
    Location:765 → 775
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:675 → 779
    GBP_C; Guanylate-binding protein, C-terminal domain

  4. XM_012093490.1 → XP_011948880.1  S phase cyclin A-associated protein in the endoplasmic reticulum isoform X7

    UniProtKB/TrEMBL
    A0A2K5N9G6
    Related
    ENSCATP00000034137.1, ENSCATT00000058413.1
    Conserved Domains (6) summary
    pfam07909
    Location:347 → 851
    DUF1663; Protein of unknown function (DUF1663)
    smart00451
    Location:734 → 766
    ZnF_U1; U1-like zinc finger
    pfam00836
    Location:473 → 570
    Stathmin; Stathmin family
    pfam16501
    Location:27 → 121
    SCAPER_N; S phase cyclin A-associated protein in the endoplasmic reticulum
    cd16269
    Location:704 → 714
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:614 → 718
    GBP_C; Guanylate-binding protein, C-terminal domain

  5. XM_012093485.1 → XP_011948875.1  S phase cyclin A-associated protein in the endoplasmic reticulum isoform X2

    See identical proteins and their annotated locations for XP_011948875.1

    UniProtKB/TrEMBL
    A0A2K5N9G6
    Conserved Domains (6) summary
    pfam07909
    Location:408 → 912
    DUF1663; Protein of unknown function (DUF1663)
    smart00451
    Location:795 → 827
    ZnF_U1; U1-like zinc finger
    pfam00836
    Location:534 → 631
    Stathmin; Stathmin family
    pfam16501
    Location:88 → 182
    SCAPER_N; S phase cyclin A-associated protein in the endoplasmic reticulum
    cd16269
    Location:765 → 775
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:675 → 779
    GBP_C; Guanylate-binding protein, C-terminal domain

  6. XM_012093482.1 → XP_011948872.1  S phase cyclin A-associated protein in the endoplasmic reticulum isoform X2

    See identical proteins and their annotated locations for XP_011948872.1

    UniProtKB/TrEMBL
    A0A2K5N9G6
    Conserved Domains (6) summary
    pfam07909
    Location:408 → 912
    DUF1663; Protein of unknown function (DUF1663)
    smart00451
    Location:795 → 827
    ZnF_U1; U1-like zinc finger
    pfam00836
    Location:534 → 631
    Stathmin; Stathmin family
    pfam16501
    Location:88 → 182
    SCAPER_N; S phase cyclin A-associated protein in the endoplasmic reticulum
    cd16269
    Location:765 → 775
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:675 → 779
    GBP_C; Guanylate-binding protein, C-terminal domain

  7. XM_012093484.1 → XP_011948874.1  S phase cyclin A-associated protein in the endoplasmic reticulum isoform X2

    See identical proteins and their annotated locations for XP_011948874.1

    UniProtKB/TrEMBL
    A0A2K5N9G6
    Conserved Domains (6) summary
    pfam07909
    Location:408 → 912
    DUF1663; Protein of unknown function (DUF1663)
    smart00451
    Location:795 → 827
    ZnF_U1; U1-like zinc finger
    pfam00836
    Location:534 → 631
    Stathmin; Stathmin family
    pfam16501
    Location:88 → 182
    SCAPER_N; S phase cyclin A-associated protein in the endoplasmic reticulum
    cd16269
    Location:765 → 775
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:675 → 779
    GBP_C; Guanylate-binding protein, C-terminal domain

  8. XM_012093492.1 → XP_011948882.1  S phase cyclin A-associated protein in the endoplasmic reticulum isoform X9

    UniProtKB/TrEMBL
    A0A2K5N9G6
    Conserved Domains (6) summary
    pfam07909
    Location:344 → 848
    DUF1663; Protein of unknown function (DUF1663)
    smart00451
    Location:731 → 763
    ZnF_U1; U1-like zinc finger
    pfam00836
    Location:471 → 567
    Stathmin; Stathmin family
    pfam16501
    Location:66 → 118
    SCAPER_N; S phase cyclin A-associated protein in the endoplasmic reticulum
    cd16269
    Location:701 → 711
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:611 → 715
    GBP_C; Guanylate-binding protein, C-terminal domain

  9. XM_012093480.1 → XP_011948870.1  S phase cyclin A-associated protein in the endoplasmic reticulum isoform X1

    UniProtKB/TrEMBL
    A0A2K5N9G6
    Conserved Domains (6) summary
    pfam07909
    Location:410 → 914
    DUF1663; Protein of unknown function (DUF1663)
    smart00451
    Location:797 → 829
    ZnF_U1; U1-like zinc finger
    pfam00836
    Location:536 → 633
    Stathmin; Stathmin family
    pfam16501
    Location:90 → 184
    SCAPER_N; S phase cyclin A-associated protein in the endoplasmic reticulum
    cd16269
    Location:767 → 777
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:677 → 781
    GBP_C; Guanylate-binding protein, C-terminal domain

  10. XM_012093489.1 → XP_011948879.1  S phase cyclin A-associated protein in the endoplasmic reticulum isoform X6

    UniProtKB/TrEMBL
    A0A2K5N9G6
    Conserved Domains (6) summary
    pfam07909
    Location:410 → 914
    DUF1663; Protein of unknown function (DUF1663)
    smart00451
    Location:797 → 829
    ZnF_U1; U1-like zinc finger
    pfam00836
    Location:537 → 633
    Stathmin; Stathmin family
    pfam16501
    Location:90 → 184
    SCAPER_N; S phase cyclin A-associated protein in the endoplasmic reticulum
    cd16269
    Location:767 → 777
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:677 → 781
    GBP_C; Guanylate-binding protein, C-terminal domain

  11. XM_012093488.1 → XP_011948878.1  S phase cyclin A-associated protein in the endoplasmic reticulum isoform X5

    UniProtKB/TrEMBL
    A0A2K5N9G6
    Conserved Domains (6) summary
    pfam07909
    Location:410 → 914
    DUF1663; Protein of unknown function (DUF1663)
    smart00451
    Location:797 → 829
    ZnF_U1; U1-like zinc finger
    pfam00836
    Location:537 → 633
    Stathmin; Stathmin family
    pfam16501
    Location:90 → 184
    SCAPER_N; S phase cyclin A-associated protein in the endoplasmic reticulum
    cd16269
    Location:767 → 777
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:677 → 781
    GBP_C; Guanylate-binding protein, C-terminal domain

  12. XM_012093491.1 → XP_011948881.1  S phase cyclin A-associated protein in the endoplasmic reticulum isoform X8

    UniProtKB/TrEMBL
    A0A2K5N9G6
    Conserved Domains (6) summary
    pfam07909
    Location:410 → 914
    DUF1663; Protein of unknown function (DUF1663)
    smart00451
    Location:797 → 829
    ZnF_U1; U1-like zinc finger
    pfam00836
    Location:536 → 633
    Stathmin; Stathmin family
    pfam16501
    Location:90 → 184
    SCAPER_N; S phase cyclin A-associated protein in the endoplasmic reticulum
    cd16269
    Location:767 → 777
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:677 → 781
    GBP_C; Guanylate-binding protein, C-terminal domain

  13. XM_012093493.1 → XP_011948883.1  S phase cyclin A-associated protein in the endoplasmic reticulum isoform X10

    UniProtKB/TrEMBL
    A0A2K5N9G6
    Conserved Domains (6) summary
    pfam07909
    Location:410 → 914
    DUF1663; Protein of unknown function (DUF1663)
    smart00451
    Location:797 → 829
    ZnF_U1; U1-like zinc finger
    pfam00836
    Location:537 → 633
    Stathmin; Stathmin family
    pfam16501
    Location:90 → 184
    SCAPER_N; S phase cyclin A-associated protein in the endoplasmic reticulum
    cd16269
    Location:767 → 777
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:677 → 781
    GBP_C; Guanylate-binding protein, C-terminal domain

  14. XM_012093494.1 → XP_011948884.1  S phase cyclin A-associated protein in the endoplasmic reticulum isoform X11

    UniProtKB/TrEMBL
    A0A2K5N9G6
    Conserved Domains (6) summary
    pfam07909
    Location:410 → 914
    DUF1663; Protein of unknown function (DUF1663)
    smart00451
    Location:797 → 829
    ZnF_U1; U1-like zinc finger
    pfam00836
    Location:537 → 633
    Stathmin; Stathmin family
    pfam16501
    Location:90 → 184
    SCAPER_N; S phase cyclin A-associated protein in the endoplasmic reticulum
    cd16269
    Location:767 → 777
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:677 → 781
    GBP_C; Guanylate-binding protein, C-terminal domain

  15. XM_012093495.1 → XP_011948885.1  S phase cyclin A-associated protein in the endoplasmic reticulum isoform X12

    Conserved Domains (5) summary
    smart00451
    Location:797 → 829
    ZnF_U1; U1-like zinc finger
    pfam00836
    Location:537 → 633
    Stathmin; Stathmin family
    pfam16501
    Location:90 → 184
    SCAPER_N; S phase cyclin A-associated protein in the endoplasmic reticulum
    cd16269
    Location:767 → 777
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:677 → 781
    GBP_C; Guanylate-binding protein, C-terminal domain
Nucleotide Protein
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